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rajlabmssm Goto Github PK

repos: 57.0 gists: 0.0

Type: Organization

Bio: The Raj Lab investigates neurodegenerative disorders through the application of computational methods to multi-omics data

Location: Icahn School of Medicine at Mount Sinai, Department of Neuroscience, New York City, New York

Blog: https://rajlab.org

rajlabmssm's Projects

minerva_notes icon minerva_notes

Tutorials, tips and tricks with the Minerva computing cluster

mofa icon mofa

Multi-Omics Factor Analysis

pd_omics_review icon pd_omics_review

Data and code associated with the Parkinson's Disease review paper by Schilder, Navarro & Raj (2021).

pd_scrnaseq icon pd_scrnaseq

Seurat analysis pipelines for Parkinson's Disease scRNA-seq data from monocytes

polyfun icon polyfun

PolyFun (POLYgenic FUNctionally-informed fine-mapping)

qtltools icon qtltools

A complete tool set for molecular QTL discovery and analysis

rajlab_website icon rajlab_website

Official website for the Raj Lab detailing personnel, updates, current projects and opportunities.

rna-pipelines icon rna-pipelines

A repo to contain various RNA-seq processing pipelines, to cut down how many different repos I have.

snakesv icon snakesv

Snakemake pipeline for SV discovery and analysis

stmn2-splicing icon stmn2-splicing

Analysis of cryptic splicing in the STMN2 locus across the NYGC ALS consortium

tensor_myeloid icon tensor_myeloid

Related scripts and files for the paper "Tensor Decomposition of Stimulated Monocyte and Macrophage Gene Expression Profiles Identifies Neurodegenerative Disease-specific Trans-eQTLs"

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