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ngvb's Introduction

About

ngvb is an R package that performs inference of latent non-Gaussian models using variational Bayes and Laplace approximations. Read the Get started to the ngvb package for an introduction to the package with several examples.

Installation instructions

It requires the packages INLA and ngme which can be installed by:

install.packages("INLA",repos=c(getOption("repos"),INLA="https://inla.r-inla-download.org/R/testing"), dep=TRUE)
remotes::install_github("davidbolin/ngme", ref = "devel")

The ngvb package can be installed using the command:

devtools::install_github("rafaelcabral96/ngvb", build_vignettes = TRUE)

ngvb's People

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ngvb's Issues

maximal index limitation 39419

Hello, I find that my efforts to run ng.check on a fitted INLA model result in the following error message, terminating the function:

  index larger than maximal 39419
Calls: ng.check ... callGeneric -> eval -> eval -> [ -> [ -> subCsp_ij -> intI
Execution halted

Is there a way to raise this limit higher? A time series predictor that replicates within groups can exceed this threshold with some ease, unfortunately. Thank you for the package.

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