This repository contains different pipelines for semantic segmentation, instance segmentation, detection and classification. The code is based on Keras and TensorFlow as backend.
To use the code please visit our documentation site.
EM image | Ground Truth | Prediction |
This repository is the base of the following work:
@Article{Franco-Barranco2021,
author={Franco-Barranco, Daniel and Muñoz-Barrutia, Arrate and Arganda-Carreras, Ignacio},
title={Stable Deep Neural Network Architectures for Mitochondria Segmentation on Electron Microscopy Volumes},
journal={Neuroinformatics},
year={2021},
month={Dec},
day={02},
issn={1559-0089},
doi={10.1007/s12021-021-09556-1},
url={https://doi.org/10.1007/s12021-021-09556-1}
}