Git Product home page Git Product logo

q2-stats's Introduction

q2-stats

WIP

q2-stats's People

Contributors

lizgehret avatar cherman2 avatar q2d2 avatar ebolyen avatar thermokarst avatar

Stargazers

Burcham Lab at UTK avatar

Watchers

Greg Caporaso avatar Nicholas Bokulich avatar  avatar  avatar Lina Kim avatar  avatar Chris Keefe avatar Keegan Evans avatar  avatar

q2-stats's Issues

Significance marks in raincloud plot

We should add the typical brackets to indicate significant results between groups.

This also means we should check that the stats table we are displaying is in fact related to the group data we are plotting.

imp: adds `formula` primitive type

Add primitive type in q2-stats and the framework for the following (currently in q2-composition under ANCOM-BC method):

def _parse_terms(formula):
    parse = formulaic.parser.parser.DefaultFormulaParser(include_intercept=False)
    terms = parse.get_ast(formula=formula).flatten()
    formula_terms = _leaf_collector(terms)
    return formula_terms

def _leaf_collector(term):
    if isinstance(term, formulaic.parser.types.Token):
        return [str(term)]

    if type(term) is not list:
        return []

    return _leaf_collector(term[1]) + _leaf_collector(term[2])

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    ๐Ÿ–– Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. ๐Ÿ“Š๐Ÿ“ˆ๐ŸŽ‰

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google โค๏ธ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.