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A related issue has been opened at q2-diversity.
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Related Issues (12)
- ENH: refactor test data to run through the QIIME 2 Framework
- Reduce decorator/decorated function coupling in _util._disallow_empty_tables()
- Possible patching bug/maintainability concerns in `test_util.py`
- TODO: update Faith's PD method to use unifrac-based impl HOT 1
- Remove psutil patches from `test_util.py` "through-the-framework" tests HOT 1
- ENH: Provide dispatch functions for q2-diversity
- beta-phylogenetic-alt: psutil(logical=False) reports too few CPUs on EC2 HOT 5
- Allow Bray-Curtis to accept Relative Frequency Data
- beta-phylogenetic-meta-passthrough: work with relative frequency and presence/absence table
- add unit tests of scipy-based qualitative alpha and beta diversity metrics
- Alpha diversity operates on dense feature tables
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