Comments (1)
Note: this PR may take care of our issue. Time to check whether psutil
behaves as expected on our test runners. If yes, then we should be good to remove the patches from these tests.
from q2-diversity-lib.
Related Issues (13)
- add unit tests of scipy-based qualitative alpha and beta diversity metrics HOT 1
- beta-phylogenetic-alt: psutil(logical=False) reports too few CPUs on EC2 HOT 5
- "Hand-build" test data for weighted unifrac HOT 1
- ENH: refactor test data to run through the QIIME 2 Framework
- Reduce decorator/decorated function coupling in _util._disallow_empty_tables()
- Possible patching bug/maintainability concerns in `test_util.py`
- TODO: update Faith's PD method to use unifrac-based impl HOT 1
- ENH: Provide dispatch functions for q2-diversity
- Allow Bray-Curtis to accept Relative Frequency Data HOT 1
- beta-phylogenetic-meta-passthrough: work with relative frequency and presence/absence table
- Alpha diversity operates on dense feature tables
- BUG: After 2022.8 faith_pd_vector.qza comes with a #SampleID index/column name HOT 9
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from q2-diversity-lib.