Comments (1)
Hey all, I've found a solution to my problem. Running python setup.py build_ext -i -f
prior to python setup.py install
did the trick. I also had to install more dependencies in my environment than is made clear in the README for this repo and to build everything on Python 2.7. The environment that works for me is the following:
# Name Version Build Channel
backports 1.0 py27_1 conda-forge
backports.functools_lru_cache 1.6.4 pyhd3eb1b0_0
backports_abc 0.5 py27_0 conda-forge
blas 2.12 openblas conda-forge
ca-certificates 2021.5.30 h033912b_0 conda-forge
certifi 2019.11.28 py27h8c360ce_1 conda-forge
cycler 0.10.0 py27_0 conda-forge
cython 0.29.15 py27hde1d37b_1 conda-forge
decorator 4.4.2 py_0 conda-forge
dp-gp-cluster 0.1 pypi_0 pypi
freetype 2.10.4 h4cff582_1 conda-forge
functools32 3.2.3.2 py27_2 conda-forge
futures 3.3.0 py27h8c360ce_1 conda-forge
gpy 1.9.9 py27h3b54f70_2 conda-forge
kiwisolver 1.1.0 py27h5cd23e5_1 conda-forge
libblas 3.8.0 12_openblas conda-forge
libcblas 3.8.0 12_openblas conda-forge
libcxx 12.0.1 habf9029_0 conda-forge
libffi 3.2.1 hb1e8313_1007 conda-forge
libgfortran 3.0.1 0 conda-forge
liblapack 3.8.0 12_openblas conda-forge
liblapacke 3.8.0 12_openblas conda-forge
libopenblas 0.3.7 hd44dcd8_1 conda-forge
libpng 1.6.37 hb0a8c7a_2 conda-forge
matplotlib 2.2.5 h694c41f_3 conda-forge
matplotlib-base 2.2.5 py27h11da6c2_1 conda-forge
ncurses 6.2 h2e338ed_4 conda-forge
numpy 1.15.4 py27hbb3c62a_1002 conda-forge
openssl 1.1.1k h0d85af4_1 conda-forge
pandas 0.24.2 py27h86efe34_0 conda-forge
paramz 0.9.5 py_0 conda-forge
pip 20.1.1 pyh9f0ad1d_0 conda-forge
pyparsing 2.4.7 pyh9f0ad1d_0 conda-forge
python 2.7.15 h8e446fc_1011_cpython conda-forge
python-dateutil 2.8.2 pyhd3eb1b0_0
python_abi 2.7 1_cp27m conda-forge
pytz 2021.1 pyhd3eb1b0_0
readline 8.1 h05e3726_0 conda-forge
scikit-learn 0.20.3 py27hca23c92_1 conda-forge
scipy 1.2.1 py27hab3da7d_2 conda-forge
setuptools 44.0.0 py27_0 conda-forge
singledispatch 3.7.0 pyhd3eb1b0_1001
six 1.16.0 pyh6c4a22f_0 conda-forge
sqlite 3.36.0 h23a322b_0 conda-forge
subprocess32 3.5.4 py27h01d97ff_0 conda-forge
tk 8.6.11 hd798d34_0 conda-forge
tornado 5.1.1 py27h1de35cc_1000 conda-forge
wheel 0.37.0 pyhd8ed1ab_1 conda-forge
zlib 1.2.11 h7795811_1010 conda-forge
from dp_gp_cluster.
Related Issues (20)
- Normalizing data
- How does Replicates being Treated in this Program HOT 3
- Job killed
- how to reduce the number of clusters? HOT 3
- Installation problem HOT 2
- "no display name..." error when plotting (in Windows Susystem for Linux)
- Problem regarding Clustering on DEG's HOT 1
- Issue when using conda and numpy
- TPM or fold change for time series dataset without treatment HOT 1
- apply on data other than expression HOT 2
- Plot data after getting results HOT 1
- TypeError: super() argument 1 must be type, not classobj
- Multi cores support
- Plotting failed for big data set HOT 1
- Unable to install setup.py file HOT 1
- MemoryError
- gcc error HOT 1
- Accession numbers list to functional/taxonomic list?
- failed with NA in input file
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from dp_gp_cluster.