David Chin's Projects
Notebooks for learning deep learning
Java code to convert data exported from Varian Eclipse® Treatment Planning System to inputs for EGSnrc, including CT images, 3D structures, and beam configurations with MLC. Requires Trispark’s Java DICOM Toolkit.
EGSnrc toolkit for Monte Carlo simulation of ionizing radiation transport
Python classes to manipulate phantoms and dose distributions used by EGSnrc
Emacs stuff. Mostly obsolete since I now use vim or Sublime Text.
Example of using entry_points in setup.py
Python package for building, comparing, annotating, manipulating and visualising trees. It provides a comprehensive API and a collection of command line tools, including utilities to work with the NCBI taxonomy tree.
A generic tool for sequence alignment
Generate a makefile rule from Fortran 90 files which USE modules
fast-stable-diffusion, +25-50% speed increase + memory efficient + DreamBooth
A variational framework for inferring population structure from SNP genotype data.
FlexLM integration for GridEngine
systemd-based service definition to run FlexLM lmgrd
Analysis of FRED economic data (from robikscube@Kaggle)
Free42 : An HP-42S Calculator Simulator
Ganglia modules for system monitoring
Geothmetic Meandian
Multi-GPU CUDA stress test
Metagenomic binning suite
CMake build of GNU Scientific Library (GSL) with Intel Math Kernel Library (MKL) cblas support
source code for HpcGridRunner
Tool that creates HPL.dat files with specific tunings based on a given node configuration
Generate HPL.dat input file for High Performance Linpack (HPL). Based on advancedclustering.com web script.
A set of scripts and tools for administrating Isilon InsightIQ
Grid Engine JSV (Job Submission Verifier) implementation for Go (#golang).
ORCID 0000-0003-1809-4431
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