pr3d4t0r / lucyfer Goto Github PK

Specify environment variable for specific Docker Compose files (one or more).

As a user, I want to be able to specify which Docker Compose file to use with the lucy command.

Proposed solution:

export LUCYFER_COMPOSE=my-compose-file.yaml if static, or LUCYFER_COMPOSE="whatever.yaml" lucy start

Implement lucy update:

• Updates the lucy script itself
• Updates the README* files
• Updates Lucyfer to the latest image

Replace wget with cURL in all shell scripts. wget doesn't come out of the box with macOS, cURL is universal... I think.

Or maybe abstract them and use whatever is available...?

Update README.md with instructions, remove 'perms` script.

The perms script was required in a legacy version of lucyfer.

The dynamic platform detection doesn't work well. Reinstate Intel vs ARM 64.

Include GPG and instructions on importing existing keys:

• GPG for signing commits and etc.
• Update to README-1st.md to export an existing key and import it into Lucyfer

https://makandracards.com/makandra-orga/37763-gpg-extract-private-key-and-import-on-different-machine - because I always forget the exact commands :P

Delete the ARM64-specific directories and other image-dependent references.

Don't forget to update lucy

It would be extremely helpful to be able to build on arm64/aarch64 docker platform to enable local native use on Apple Silicon and other arm64 platforms without requiring rosetta2 or qemu emulation.

• Matt Fulgo

Background:

https://issuemode.com/issues/jupyter/design/18461754

Add the openpyxl package to Lucyfer and Lucyfer/Docker detection to lucy.

Syntax:

lucy[fer] start | stop | status

It might be handy to be able to run the lucy script with some command that prints out the jupyter token 😁

Via @phillipross - Make the Lucyfer and Kallisto public ports configurable. Prior to this update, the ports are hard-coded to:

• Lucyfer: 8805
• Kallisto: 8809

To override the ports, define these environment variables with overriding values:

• LUCYFER_PORT=8805
• KALLISTO_PORT=8809

Some users show Docker.app in ps axu instead of Docker Desktop.app for whatever reason. Ensure that lucy detects both before aborting loading the services.

From an apple silicon machine running docker desktop for mac:

% docker container run --rm -it pr3d4t0r/lucyfer-m:latest uname -a
WARNING: The requested image's platform (linux/amd64) does not match the detected host platform (linux/arm64/v8) and no specific platform was requested
Linux 7730b3baa2c4 5.10.124-linuxkit #1 SMP PREEMPT Thu Jun 30 08:18:26 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux

From an intel machine running docker desktop for mac:

% docker container run --rm -it pr3d4t0r/lucyfer-m:latest uname -a
Linux abd6e39f3e6b 5.10.124-linuxkit #1 SMP Thu Jun 30 08:19:10 UTC 2022 x86_64 x86_64 x86_64 GNU/Linux

Include bat in the build and add a symlink to batcat.

apt-get install bat

Low priority: use scipy-notebook instead of datascience-notebook until R, Julia M1/ARM dependencies are resolved.

Merge runlucyfer and runlucykal,. There is no need for both, if done right.

The following shows the image versions:

The following shows the start of the notebook

The following shows the tabular output of the query first, then the error when asking for the diagram output

note the error shown under the cell with the %display diagram
error reads Error: Response processing error: 'ConjunctiveGraph' object has no attribute 'load'

Include pandoc if it’s not already shipping with base image.

Include sparqlwrapper in the build - for when rdflib isn't enough.

Kotlin and a recent JVM/OpenJDK are already available; maybe the notebook will work with the existing set up and not make things complicated?

Add support for graph-notebook - Apache 2 license.

Initial commit and setup

Similar to #43, in this case the start command can take these forms:

start - uses the default lucyfer-compose.yaml' and defines lucyferrunning on port8085`

start 8085 - changes the port from 8805 to 8085, the container name is automagically generated

start 8085 io - changes the port to 8085 and the container name is lucyfer

Include bat, hexdump among the Lucyfer tools.

Enable Kallisto DB and lucy to support it independently of Lucyfer.

Check the AWS Graph Notebook and see if there's something there we want to copy.

Improve the Vim skeleton to set focus to open file if called with arguments. The current configuration sets the focus on NERDTree even if a file name was passed on the CLI.

https://github.com/yunabe/tslab

New scikit version update avialable

The new updated scikit version is 1.1.3
Lucyfer's current version is 1.1.2