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paureel's Projects

alphafold_finetune icon alphafold_finetune

Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions

chromaviz icon chromaviz

A package for visualising Chroma vector collections in 3D

crypto_sim icon crypto_sim

Simulation of crytocurrency price trajectories using jump-diffusion models

deeplearningcourse icon deeplearningcourse

The official repository of Deep learning and machine learning in science (deeplea17em) course @ ELTE.

dnabert icon dnabert

DNABERT: pre-trained Bidirectional Encoder Representations from Transformers model for DNA-language in genome

esm icon esm

Evolutionary Scale Modeling (esm): Pretrained language models for proteins

evobind icon evobind

In silico directed evolution of peptide binders with AlphaFold

gacd_final icon gacd_final

Final assessment of Getting and Cleaning Data course

gatk icon gatk

Germline Variant Calling Nextflow Pipeline Based On GATK4 Best Practices

geodock icon geodock

Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.

gpt-researcher icon gpt-researcher

GPT based autonomous agent that does online comprehensive research on any given topic

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