This is a repository for ARE213 section notes, taught by Michael Anderson at UC Berkeley. The project is equipped to deal with R and Clojure code. Clojure is a functional programming language that is well-suited for multi-threaded processing. However, for this class, we will deal mainly with the R code, unless someone is particularly interested in learning this exciting new language. To find the text and code for this project, you'll have to navigate to the src/r directory. Each section has its own subdirectory that contains at least three core files:

1. An org-mode document .org that compiles to the .pdf, .tex, and .R files. In fact, the org-mode document is the code; and you can dynamically update all downstream documents from within Emacs' org-mode. You do not have to interact with the org-mode document directly if you are not using Emacs, but rather just with the R code or PDF write-up. If you'd like to get set up with Emacs (highly recommended) then please see the next section of this README.

2. A PDF of the section notes, which effectively documents the code. If you are only interested in following along, rather than running the code yourself, just browse to the .pdf file for the section (e.g. sec-01.pdf) and click "view raw". The PDF will begin downloading immediately. https://github.com/danhammer/applied-metrics/tree/develop/src/r/section-01

3. An R script that compiles all of the code within the PDF. Note that there is no documentation within the code. Instead, the code is documented from the PDF description.

The sections are organized as follows:

section-01 Summary statistics in R

section-02 SUTVA and nonparametric regression

section-06 Propensity Score Matching

section-07 Random and Fixed Effects

section-08 Difference-n-differencess Estimation

section-10 Instrumental Variables

section-11 Regression Discontinuity

section-12 Time series warping

This project can and should be treated like any other open source, collaborative coding project. If you are interested in helping me make this project better, fork the repo, edit the screwy files, and send a pull request. I will review and merge the changes -- until someone else takes over!

If you are running Emacs, then you have access to org-mode, an open source solution for interactive coding and reproducible research. The code, documentation, and results are all bundled into the same file. The #+RESULTS output is automatically generated from the immediately preceding code block.

A few things to note. When you try to compile the .org files to a PDF document, you may have to compile it twice or reload the buffer using C-u M-x org-reload. To tangle the code within the org-mode document to an .R script, you can use the key binding C-c C-v t.

You can highlight code by using the minted package in LaTeX. For this, from the command line, make sure that you invoke pdflatex with the -shell-escape flag. For example,

cd ~/Dropbox/github/danhamer/applied-metrics/src/r/section-02
pdflatex -shell-escape sec-02

Ensure that you have the proper minted.sty file by downloading the zipfile, installing it, and then ensuring that LaTeX knows where everything is:

unzip minted.zip
cd minted/
latex minted.ins
sudo texhash

Finally, you will have to add the following to your .emacs.d/init.el file, and make sure it doesn't conflict with anything else in there:

(require 'org-latex)
(setq org-export-latex-listings t)
(setq org-export-latex-listings 'minted)
(add-to-list 'org-export-latex-packages-alist '("" "minted"))
(add-to-list 'org-export-latex-packages-alist '("" "color"))
(add-to-list 'org-export-latex-minted-langs '(R "r"))