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MASS installation failing
Here is the log.
Installing MASS [7.3-54] ...
FAILED
Error installing package 'MASS':
Error: Error: install of package 'MASS' failed [error code 1]
================================
* installing *source* package ‘MASS’ ...
** package ‘MASS’ successfully unpacked and MD5 sums checked
** using staged installation
** libs
using C compiler: ‘gcc (Ubuntu 11.3.0-1ubuntu1~22.04) 11.3.0’
gcc -I"/usr/share/R/include" -DNDEBUG -fpic -g -O2 -ffile-prefix-map=/build/r-base-JhpCKt/r-base-4.3.0=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -c MASS.c -o MASS.o
MASS.c:37:23: error: unknown type name ‘Sint’; did you mean ‘uint’?
37 | VR_sammon(double *dd, Sint *nn, Sint *kd, double *Y, Sint *niter,
| ^~~~
| uint
MASS.c:37:33: error: unknown type name ‘Sint’; did you mean ‘uint’?
37 | VR_sammon(double *dd, Sint *nn, Sint *kd, double *Y, Sint *niter,
| ^~~~
| uint
MASS.c:37:54: error: unknown type name ‘Sint’; did you mean ‘uint’?
37 | VR_sammon(double *dd, Sint *nn, Sint *kd, double *Y, Sint *niter,
| ^~~~
| uint
MASS.c:38:27: error: unknown type name ‘Sint’; did you mean ‘uint’?
38 | double *stress, Sint *trace, double *aa, double *tol)
| ^~~~
| uint
MASS.c:168:8: error: unknown type name ‘Sint’
168 | static Sint *ord; /* ranks of dissimilarities */
| ^~~~
MASS.c:169:8: error: unknown type name ‘Sint’
169 | static Sint *ord2; /* inverse ordering (which one is rank i?) */
| ^~~~
MASS.c:170:8: error: unknown type name ‘Sint’
170 | static Sint n; /* number of dissimilarities */
| ^~~~
MASS.c:171:8: error: unknown type name ‘Sint’
171 | static Sint nr; /* number of data points */
| ^~~~
MASS.c:172:8: error: unknown type name ‘Sint’
172 | static Sint nc; /* # cols of fitted configuration */
| ^~~~
MASS.c:181:31: error: unknown type name ‘Sint’; did you mean ‘uint’?
181 | VR_mds_fn(double *, double *, Sint *, double *, Sint *,
| ^~~~
| uint
MASS.c:181:49: error: unknown type name ‘Sint’; did you mean ‘uint’?
181 | VR_mds_fn(double *, double *, Sint *, double *, Sint *,
| ^~~~
| uint
MASS.c:182:21: error: unknown type name ‘Sint’; did you mean ‘uint’?
182 | double *, Sint *, Sint *, double *, Sint *, double *);
| ^~~~
| uint
MASS.c:182:29: error: unknown type name ‘Sint’; did you mean ‘uint’?
182 | double *, Sint *, Sint *, double *, Sint *, double *);
| ^~~~
| uint
MASS.c:182:47: error: unknown type name ‘Sint’; did you mean ‘uint’?
182 | double *, Sint *, Sint *, double *, Sint *, double *);
| ^~~~
| uint
MASS.c:188:18: error: unknown type name ‘Sint’; did you mean ‘uint’?
188 | VR_mds_init_data(Sint *pn, Sint *pc, Sint *pr, Sint *orde,
| ^~~~
| uint
MASS.c:188:28: error: unknown type name ‘Sint’; did you mean ‘uint’?
188 | VR_mds_init_data(Sint *pn, Sint *pc, Sint *pr, Sint *orde,
| ^~~~
| uint
MASS.c:188:38: error: unknown type name ‘Sint’; did you mean ‘uint’?
188 | VR_mds_init_data(Sint *pn, Sint *pc, Sint *pr, Sint *orde,
| ^~~~
| uint
MASS.c:188:48: error: unknown type name ‘Sint’; did you mean ‘uint’?
188 | VR_mds_init_data(Sint *pn, Sint *pc, Sint *pr, Sint *orde,
| ^~~~
| uint
MASS.c:189:18: error: unknown type name ‘Sint’; did you mean ‘uint’?
189 | Sint *ordee, double *xx, double *p)
| ^~~~
| uint
MASS.c: In function ‘fminfn’:
MASS.c:240:5: error: unknown type name ‘Sint’; did you mean ‘uint’?
240 | Sint do_derivatives = 0;
| ^~~~
| uint
MASS.c:243:5: warning: implicit declaration of function ‘VR_mds_fn’; did you mean ‘VR_mds_unload’? [-Wimplicit-function-declaration]
243 | VR_mds_fn(y, yf, &n, &ssq, ord2, x, &nr, &nc, 0, &do_derivatives,
| ^~~~~~~~~
| VR_mds_unload
MASS.c: In function ‘fmingr’:
MASS.c:252:5: error: unknown type name ‘Sint’; did you mean ‘uint’?
252 | Sint do_derivatives = 1;
| ^~~~
| uint
MASS.c: At top level:
MASS.c:263:26: error: unknown type name ‘Sint’; did you mean ‘uint’?
263 | VR_mds_dovm(double *val, Sint *maxit, Sint *trace, double *xx, double *tol)
| ^~~~
| uint
MASS.c:263:39: error: unknown type name ‘Sint’; did you mean ‘uint’?
263 | VR_mds_dovm(double *val, Sint *maxit, Sint *trace, double *xx, double *tol)
| ^~~~
| uint
MASS.c:280:34: error: unknown type name ‘Sint’; did you mean ‘uint’?
280 | VR_mds_fn(double *y, double *yf, Sint *pn, double *pssq, Sint *pd,
| ^~~~
| uint
MASS.c:280:58: error: unknown type name ‘Sint’; did you mean ‘uint’?
280 | VR_mds_fn(double *y, double *yf, Sint *pn, double *pssq, Sint *pd,
| ^~~~
| uint
MASS.c:281:22: error: unknown type name ‘Sint’; did you mean ‘uint’?
281 | double *x, Sint *pr, Sint *pncol, double *der,
| ^~~~
| uint
MASS.c:281:32: error: unknown type name ‘Sint’; did you mean ‘uint’?
281 | double *x, Sint *pr, Sint *pncol, double *der,
| ^~~~
| uint
MASS.c:282:11: error: unknown type name ‘Sint’; did you mean ‘uint’?
282 | Sint *do_derivatives, double *p)
| ^~~~
| uint
MASS.c:356:12: error: unknown type name ‘Sint’; did you mean ‘uint’?
356 | VR_ucv_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
| ^~~~
| uint
MASS.c:356:21: error: unknown type name ‘Sint’; did you mean ‘uint’?
356 | VR_ucv_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
| ^~~~
| uint
MASS.c:356:31: error: unknown type name ‘Sfloat’; did you mean ‘float’?
356 | VR_ucv_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
| ^~~~~~
| float
MASS.c:356:42: error: unknown type name ‘Sint’; did you mean ‘uint’?
356 | VR_ucv_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
| ^~~~
| uint
MASS.c:356:51: error: unknown type name ‘Sfloat’; did you mean ‘float’?
356 | VR_ucv_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
| ^~~~~~
| float
MASS.c:356:62: error: unknown type name ‘Sfloat’; did you mean ‘float’?
356 | VR_ucv_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
| ^~~~~~
| float
MASS.c:373:12: error: unknown type name ‘Sint’; did you mean ‘uint’?
373 | VR_bcv_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
| ^~~~
| uint
MASS.c:373:21: error: unknown type name ‘Sint’; did you mean ‘uint’?
373 | VR_bcv_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
| ^~~~
| uint
MASS.c:373:31: error: unknown type name ‘Sfloat’; did you mean ‘float’?
373 | VR_bcv_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
| ^~~~~~
| float
MASS.c:373:42: error: unknown type name ‘Sint’; did you mean ‘uint’?
373 | VR_bcv_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
| ^~~~
| uint
MASS.c:373:51: error: unknown type name ‘Sfloat’; did you mean ‘float’?
373 | VR_bcv_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
| ^~~~~~
| float
MASS.c:373:62: error: unknown type name ‘Sfloat’; did you mean ‘float’?
373 | VR_bcv_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
| ^~~~~~
| float
Traceback (most recent calls last):
12: renv::restore()
11: renv_restore_run_actions(project, diff, current, lockfile, rebuild)
10: renv_install_impl(records)
9: renv_install_staged(records)
8: renv_install_default(records)
7: handler(package, renv_install_package(record))
6: renv_install_package(record)
5: withCallingHandlers(renv_install_package_impl(record), error = function(e) {
vwritef("\tFAILED")
writef(e$output)
})
4: renv_install_package_impl(record)
3: r_cmd_install(package, path)
2: r_exec_error(package, output, "install", status)
1: stop(error)
Execution halted
MASS.c:391:13: error: unknown type name ‘Sint’; did you mean ‘uint’?
391 | VR_phi4_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
| ^~~~
| uint
MASS.c:391:22: error: unknown type name ‘Sint’; did you mean ‘uint’?
391 | VR_phi4_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
| ^~~~
| uint
MASS.c:391:32: error: unknown type name ‘Sfloat’; did you mean ‘float’?
391 | VR_phi4_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
| ^~~~~~
| float
MASS.c:391:43: error: unknown type name ‘Sint’; did you mean ‘uint’?
391 | VR_phi4_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
| ^~~~
| uint
MASS.c:391:52: error: unknown type name ‘Sfloat’; did you mean ‘float’?
391 | VR_phi4_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
| ^~~~~~
| float
MASS.c:391:63: error: unknown type name ‘Sfloat’; did you mean ‘float’?
391 | VR_phi4_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
| ^~~~~~
| float
MASS.c:409:13: error: unknown type name ‘Sint’; did you mean ‘uint’?
409 | VR_phi6_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
| ^~~~
| uint
MASS.c:409:22: error: unknown type name ‘Sint’; did you mean ‘uint’?
409 | VR_phi6_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
| ^~~~
| uint
MASS.c:409:32: error: unknown type name ‘Sfloat’; did you mean ‘float’?
409 | VR_phi6_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
| ^~~~~~
| float
MASS.c:409:43: error: unknown type name ‘Sint’; did you mean ‘uint’?
409 | VR_phi6_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
| ^~~~
| uint
MASS.c:409:52: error: unknown type name ‘Sfloat’; did you mean ‘float’?
409 | VR_phi6_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
| ^~~~~~
| float
MASS.c:409:63: error: unknown type name ‘Sfloat’; did you mean ‘float’?
409 | VR_phi6_bin(Sint *n, Sint *nb, Sfloat *d, Sint *x, Sfloat *h, Sfloat *u)
| ^~~~~~
| float
MASS.c:428:12: error: unknown type name ‘Sint’; did you mean ‘uint’?
428 | VR_den_bin(Sint *n, Sint *nb, Sfloat *d, Sfloat *x, Sint *cnt)
| ^~~~
| uint
MASS.c:428:21: error: unknown type name ‘Sint’; did you mean ‘uint’?
428 | VR_den_bin(Sint *n, Sint *nb, Sfloat *d, Sfloat *x, Sint *cnt)
| ^~~~
| uint
MASS.c:428:31: error: unknown type name ‘Sfloat’; did you mean ‘float’?
428 | VR_den_bin(Sint *n, Sint *nb, Sfloat *d, Sfloat *x, Sint *cnt)
| ^~~~~~
| float
MASS.c:428:42: error: unknown type name ‘Sfloat’; did you mean ‘float’?
428 | VR_den_bin(Sint *n, Sint *nb, Sfloat *d, Sfloat *x, Sint *cnt)
| ^~~~~~
| float
MASS.c:428:53: error: unknown type name ‘Sint’; did you mean ‘uint’?
428 | VR_den_bin(Sint *n, Sint *nb, Sfloat *d, Sfloat *x, Sint *cnt)
| ^~~~
| uint
MASS.c:466:31: error: ‘VR_bcv_bin’ undeclared here (not in a function)
466 | {"VR_bcv_bin", (DL_FUNC) &VR_bcv_bin, 6},
| ^~~~~~~~~~
MASS.c:467:31: error: ‘VR_den_bin’ undeclared here (not in a function)
467 | {"VR_den_bin", (DL_FUNC) &VR_den_bin, 5},
| ^~~~~~~~~~
MASS.c:468:32: error: ‘VR_mds_dovm’ undeclared here (not in a function); did you mean ‘VR_mds_unload’?
468 | {"VR_mds_dovm", (DL_FUNC) &VR_mds_dovm, 5},
| ^~~~~~~~~~~
| VR_mds_unload
MASS.c:469:30: error: ‘VR_mds_fn’ undeclared here (not in a function); did you mean ‘VR_mds_unload’?
469 | {"VR_mds_fn", (DL_FUNC) &VR_mds_fn, 11},
| ^~~~~~~~~
| VR_mds_unload
MASS.c:470:37: error: ‘VR_mds_init_data’ undeclared here (not in a function)
470 | {"VR_mds_init_data", (DL_FUNC) &VR_mds_init_data, 7},
| ^~~~~~~~~~~~~~~~
MASS.c:472:32: error: ‘VR_phi4_bin’ undeclared here (not in a function)
472 | {"VR_phi4_bin", (DL_FUNC) &VR_phi4_bin, 6},
| ^~~~~~~~~~~
MASS.c:473:32: error: ‘VR_phi6_bin’ undeclared here (not in a function)
473 | {"VR_phi6_bin", (DL_FUNC) &VR_phi6_bin, 6},
| ^~~~~~~~~~~
MASS.c:474:30: error: ‘VR_sammon’ undeclared here (not in a function)
474 | {"VR_sammon", (DL_FUNC) &VR_sammon, 9},
| ^~~~~~~~~
MASS.c:475:31: error: ‘VR_ucv_bin’ undeclared here (not in a function)
475 | {"VR_ucv_bin", (DL_FUNC) &VR_ucv_bin, 6},
| ^~~~~~~~~~
make: *** [/usr/lib/R/etc/Makeconf:191: MASS.o] Error 1
ERROR: compilation failed for package ‘MASS’
* removing ‘/home/runner/work/_temp/Library/.renv/1/MASS’
Error: Process completed with exit code 1.
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