A container-based installation of PyMol.
It comes bundled with iPython and iPyMol, and respective dependencies (NumPy, SciPy..)
Get Docker image from the Docker hub:
docker pull ocramz/docker-pymol
Run image (this also starts a Python interpreter with PyMol loaded without graphical user interface) :
docker run -it ocramz/docker-pymol
Carlos Hernandez (iPyMol) : https://github.com/cxhernandez/ipymol
Dan Connolly (iPython-docker): https://github.com/dckc/ipython-docker