Comments (2)
I think change https://github.com/nickjcroucher/gubbins/blob/master/python/gubbins/common.py#L227
gubbins_command = " ".join([gubbins_exec, input_args.alignment_filename])
to
gubbins_command = f"{gubbins_exec} \"{input_args.alignment_filename}\""
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Thank you! Incorporated in #397.
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