Comments (3)
pothepanda09
commented on June 26, 2024
I'm also running into the same issue! I thought it was the minimum sample/feature tags, so I set it to zero:
min_samps_gene_expr: 0
min_gene_expr: 0
min_samps_feature_expr: 0
min_feature_expr: 0
min_samps_feature_prop: 0
min_feature_prop: 0
That wasn't the issue either, so I'm hoping someone knows how to solve this.
from rnasplice.
jma1991
commented on June 26, 2024
Hey @GimenaA
Thanks for reporting your issue. Can you please try with the latest release? I have a feeling you are using an older version where we didn't handle sample names with dashes in them correctly. See this PR for details.
from rnasplice.
jma1991
commented on June 26, 2024
Closing as completed. Please re-open if you are still facing the same issue.
from rnasplice.
Related Issues (20)
- link to example contrastsheet.csv is not working HOT 1
- Empty output for BAM+rMats HOT 2
- make contrasts file names consistent with those of the differentialabundance pipeline HOT 1
- Missing rMATS arguments HOT 2
- DEXSeq-DTU Stager pScreenAdjusted HOT 1
- sashimi_plot error HOT 2
- contrast file problem? HOT 7
- EXITING because of FATAL ERROR: Genome version: 20201 is INCOMPATIBLE with running STAR version: 2.7.9a HOT 2
- MISO error HOT 3
- The processes for splitting files are running very slowly with large numbers of input samples HOT 5
- Error: suppa_split_file.R Input_file must contain samplesheet samples. HOT 2
- ERROR ~ Error executing process > 'NFCORE_RNASPLICE:RNASPLICE:DRIMSEQ_DEXSEQ_DTU_SALMON:DRIMSEQ_FILTER (1)' HOT 11
- Error single-end execution HOT 1
- Error in SUPPA: Clustergroups are assigned incorrectly HOT 4
- test profile: miso_index failure HOT 19
- example contrastsheet.csv missing HOT 1
- Add some more tags to make the pipeline easier to find HOT 1
- DRIMSEQ_FILTER error HOT 5
- STAGER error: subscript out of bounds HOT 4
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from rnasplice.