nextgenusfs Goto Github PK
Name: Jon Palmer
Type: User
Location: Palo Alto, CA
Name: Jon Palmer
Type: User
Location: Palo Alto, CA
AMPtk: Amplicon ToolKit for NGS data (formally UFITS)
AUGUSTUS v3.2.1 for installation on Mac OS X
Script to take folder of ab1 files generated from end sequencing a plasmid and map them to an assembly
Conda recipes for the bioconda channel.
Biological Graphic tool in Python
BUSCOlite: simplified conserved marker gene prediction for genome annotation
Docker version of gene prediction software GeneMark
dw is a docker wrapper bash script
Fast genome-wide functional annotation through orthology assignment
source code for EVM
Scripts for assembly of PE Illumina from pooled BAC/FACs
Feature selection for biological data formats (Fizzy)
Eukaryotic Genome Annotation Pipeline
Scripts used in funannotate manuscript
Eukaryotic genome annotation software.
FUNGuild: parsing OTUs into functional guilds
Generates an NCBI .tbl file of annotations on a genome.
gapmm2: gapped alignment using minimap2 (align transcripts to genome)
Curated list of gene names and product descriptions that pass NCBI genome submission rules.
collection of random scripts for processing genome related files. the shell scripts are specific to my environment and may not work elsewhere.
GFF toolkit
:microscope: Scientific formulae for the Homebrew package manager
local homebrew tap
De novo clustering of long transcript reads into genes
Jon's Awesome Assembly Wrapper Script
Lab Meeting Walkthrough
scripts for laetiporus ms
Long read genome assembly scripts
Sequence correction provided by ONT Research
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.