neherlab Goto Github PK
Name: neherlab
Type: Organization
Bio: Computational biology at the Biozentrum, Basel
Location: Basel, Switzerland
Blog: https://neherlab.org
Name: neherlab
Type: Organization
Bio: Computational biology at the Biozentrum, Basel
Location: Basel, Switzerland
Blog: https://neherlab.org
Scripts producing figures and analysis of Hodcroft et al, 2020
Tutorials, data, and results of the 2019 KRISP nextstrain workshop
BA.2.86 project with Sigal lab
Generate and analyze beta coalescent trees
Get mutations in cluster by querying from LAPIS API
simple viral consensus assembly
Model coronavirus seasonality and explore consequences for nCoV dynamics
Models of COVID-19 outbreak trajectories and hospital demand
Data preprocessing scripts and preprocessed data storage for COVID-19 Scenarios project
Manuscript: Inferring HIV Escape Rates from Multi-Locus Genotype Data
Demonstrates how to embed Auspice tree into React application
Code processing and analyzing data from Dyrdak et al, 2019
scripts that generate figures for Dyrdak et al 2018 manuscript
FFPopSim is a collection of C++ classes and a Python interface for efficient simulation of large populations, in particular when the product of mutation rate and population size is larger than one. It consists of one library for individual-based simulations, and a complementary one for simulation of the entire genotype distribution. The latter is coded efficiently using Fast-Fourier Transforms to speed up recombination operations.
Prediction fitness of leaves on a genealogical tree
Code for SIR models with antigenic evolution
Bacterial genome assembly pipeline
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.