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Name: Bakhtiyor Nosirov
Type: User
Company: RIKEN Center Biosystems Dynamics Research Center
Location: Kobe, Japan
Name: Bakhtiyor Nosirov
Type: User
Company: RIKEN Center Biosystems Dynamics Research Center
Location: Kobe, Japan
integrated RNA-seq Analysis Pipeline
R/shiny interface for interactive visualization of data in objects derived from the SummarizedExperiment class
Torch code for our CVPR 2016 paper "Joint Unsupervised LEarning of Deep Representations and Image Clusters"
Near-optimal RNA-Seq quantification
Deep Learning for humans
Python implementation of the Loom file format - http://loompy.org
MACA: Marker-based automatic cell-type annotation for single cell expression data
Practical Full-Stack Machine Learning
MAGIC (Markov Affinity-based Graph Imputation of Cells), is a method for imputing missing values restoring structure of large biological datasets.
The source code to cluster multiple manifolds with intersection
ChIP-seq/RNA-seq analysis software suite for gene expression heatmaps
A random-forest-based approach for imputing clustered incomplete data
Implementation of "Deep Unsupervised Clustering Using Mixture of Autoencoders"
MultiNicheNet: a flexible framework for differential cell-cell communication analysis from multi-sample multi-condition single-cell transcriptomics data
muon is a multimodal omics Python framework
Multi-sample multi-group scRNA-seq analysis tools
ImageJ plugin for image analysis of porous materials
Python code and data sets used in the post on neural networks.
Autoencoder + Deep Autoencoder + Deep Convoluted Autoencoder + Hebbian
R package for analyzing and interactively exploring large single-cell RNA-seq datasets
An algorithm for mapping cell state transitions.
STAR + HTSeq + featureCounts RNA-seq processing pipeline environment and wrapper script, including SRA query, download, and caching functionality and useful reuse/restart features
popsicleR, a flexible R package aimed at providing most of the necessary quality controls and preliminary information for complete and detailed analysis of single cell RNA-seq data.
Fast Wilcoxon and auROC
Python implementation of Robust Continuous Clustering
This function implements quantile normalization in python matrix
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.