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paste

Python Paste (core) repository

pcs

pcs docker image with pacemaker and corosync

planemo

Command-line utilities to assist in developing tools for the Galaxy project.

planemo-action

For github actions

planemo-ci-action

Installs planemo and discovers changed repositories of tools or workflows

planemo-dev-action

Just a playground for now

planemo-monitor

Planemo scripting to monitor repositories and register tool containers.

pulsar

Distributed job execution application built for Galaxy

pydantic-tes

Pydantic Models for GA4GH Task Execution Service.

pylibmagic

scikit-build project with CMake for compiling libmagic

pysam

Pysam is a Python module for reading and manipulating SAM/BAM/VCF/BCF files. It's a lightweight wrapper of the htslib C-API, the same one that powers samtools, bcftools, and tabix.

pysam-compare-reads

cythonized function to compare reads by name

pysradb

Package for fetching metadata and downloading data from SRA

pytest-xdist

pytest plugin for distributed testing and loop-on-failures testing modes.

python-etcd

A python client for etcd

python-irodsclient

A Python API for iRODS

python-temporary

Context managers for managing temporary files and directories.

revue-draggable

A Vue component that makes anything draggable 🤏 Easy to use and control. Supports Vue3 and Vue2 🦾

sars-cov-2

Initial analysis of COVID-19 data using Galaxy, BioConda and public research infrastructures

scanpy

Single-Cell Analysis in Python. Scales to >1M cells.

schema_salad

Semantic Annotations for Linked Avro Data

seaplotlib

plotting collection for genomic data

sequence_utils

Galaxy's sequence utilities are a set of Python modules for reading, analyzing, and converting sequence formats.

setup-chromedriver

ChromeDriver for use in GitHub Actions

singularity

Singularity: Application containers for Linux

singularity-build-bot

Nightly build of Singularity containers

sqlalchemy

The Database Toolkit for Python

sqlalchemy-json

Full-featured JSON type with mutation tracking for SQLAlchemy

sqlalchemy-mutable

sra-tools

SRA Tools