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a2wsgi

Convert WSGI app to ASGI app or ASGI app to WSGI app.

actions-publish-docker

This GitHub action allows you to create and publish Docker images into a Docker registry.

ansible

Ansible is a radically simple IT automation platform that makes your applications and systems easier to deploy. Avoid writing scripts or custom code to deploy and update your applications— automate in a language that approaches plain English, using SSH, with no agents to install on remote systems.

ansible-galaxy

An Ansible role for managing a Galaxy (http://galaxyproject.org) server.

ansible-galaxy-extras

Ansible roles to configure assorted compontents for an Ubuntu VM or container configured with https://github.com/galaxyproject/ansible-galaxy with production services including nginx, uwsgi, supervisor, protftp, and slurm.

ansible-galaxy-os

An Ansible role is for configuring the base operating system useful for running Galaxy.

ansible-galaxy-tools

An Ansible role for automated installation of tools from a Tool Shed into Galaxy.

ansible-influxdb

Ansible Galaxy InfluxDB Role

ansible-miniconda-role

ansible role to install miniconda, Python-agnostic binary package manager

ansible-modules-extras

Ansible extra modules - these modules ship with ansible

ansible-postgresql-objects

A simple Ansible role for managing PostgreSQL objects (users, groups, databases, and privileges).

ansible-role-sentry

ansible-tpv-lint

bdbag

Big Data Bag Utilities

bedtools2

A powerful toolset for genome arithmetic.

bioblend

A Python library for interacting with CloudMan and Galaxy API

bioblend-tutorial

bioconda-containers

Container images for usage inside of Bioconda

bioconda-recipes

Conda recipes for the bioconda channel.

biohackathon-projects-2019

This repository is meant for the participants of the BioHackathon hosted in Paris in Nov 2019 to share ideas, create issues, manage projects, publish materials, create code, etc.

bioinformatics-workflows

minimal example implementations for bioinformatics workflow managers

bwa

Burrow-Wheeler Aligner for pairwise alignment between DNA sequences

bx-python

Tools for manipulating biological data, particularly multiple sequence alignments

cargo-port

cache packages permanently

chromatin_states

co-op

conda-recipes

build and test recipes for conda

conda_debian6

cookiecutter-pypackage

Cookiecutter template for a Python package.

dagobah-training

Galaxy admin trainings for aspiring Skywalkers