Comments (3)
lilhope
commented on July 24, 2024
especially, I wonder what's the X_MAX,Y_MAX,Z_MAXmean?
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mattmacy
commented on July 24, 2024
X_MAX, Y_MAX, Z_MAX are variables to specify the maximum dimensions when trying to normalize all of the scans. vox_spacing is the voxel spacing in millimeters.
I don't have the sample code where I am now, but something like
dmean, dstddev = normalize_lung_CT(src="luna_dir", dst="luna_resize_dir", X_MAX=128, Y_MAX=160, Z_MAX=128, vox_spacing=2)
You'll have to look at the actual dimensions to determine what sane values are.
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tomclavmaster
commented on July 24, 2024
Hi @lilhope, I'm wondering what values for X_MAX, Y_MAX, and Z_MAX you ended up using. @mattmacy Do you have the sample code so you can take a look at the values you used for preprocessing? I'm struggling with this step.
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