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Comments (6)

HnanYang avatar HnanYang commented on August 27, 2024

I had the same problem. It may be related to the data path.

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cue1997 avatar cue1997 commented on August 27, 2024

I had the same problem. It may be related to the data path.

Hi I have encountered the same problem. Has your issue been resolved?

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LaporteThomas avatar LaporteThomas commented on August 27, 2024

Hi, have you find a way to resolve this error ? I'm stuck with the same problem.
I don't find the function that download the dataset.

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PussyCat0700 avatar PussyCat0700 commented on August 27, 2024

Seems to be located in this line in train.py?
"trainSet = dset.LUNA16(root='luna16', images=ct_images, targets=ct_targets,..."
It seems to be the problem with torchbiomed, at torchbiomed\datasets\luna16,py:
"sample_label = load_label(label_path, label_list[0])"
where it needs LUNA16 dataset as input. Here is part one of it as described in README.md:
https://zenodo.org/record/3723295/

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PussyCat0700 avatar PussyCat0700 commented on August 27, 2024

Seems to be located in this line in train.py?
"trainSet = dset.LUNA16(root='luna16', images=ct_images, targets=ct_targets,..."
It seems to be the problem with torchbiomed, at torchbiomed\datasets\luna16,py:
"sample_label = load_label(label_path, label_list[0])"
where it needs LUNA16 dataset as input. Here is part one of it as described in README.md:
https://zenodo.org/record/3723295/

Dataset seems to be pretty huge btw, I am currently downloading a subset of part one to see if it works out.

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YellowLight021 avatar YellowLight021 commented on August 27, 2024

what is the use of “nodule_masks = "normalized_brightened_CT_2_5"
lung_masks = "inferred_seg_lungs_2_5"
ct_images = "luna16_ct_normalized"” 。
it seems the file in luna16,however i download luna16 and not find "normalized_brightened_CT_2_5" "inferred_seg_lungs_2_5"
"luna16_ct_normalized"files.
How can i use this luna15dataset

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