Name: Matilda Åslin
Type: User
Company: Uppsala University, SciLifeLab Genomics, NGI Uppsala
Bio: [She/Her]
Bioinformatician/System developer at NGI Uppsala, SciLifeLab.
Location: Uppsala, Sweden
Matilda Åslin's Projects
Rest service for handling archive uploads
REST service for verifying uploaded archives
Playing around with the Spotify API
StackStorm (aka "IFTTT for Ops") is event-driven automation for auto-remediation, security responses, troubleshooting, deployments, and more. Includes rules engine, workflow, 160 integration packs with 6000+ actions (see https://exchange.stackstorm.org) and ChatOps. Installer at https://docs.stackstorm.com/install/index.html. Questions? https://forum.stackstorm.com/.
StackStorm docker-compose deployment
Test data to be used for automated testing with the nf-core pipelines
Python package with helper tools for the nf-core community.
Simple nextflow workflow to compare original fastqs with fastqs generated by https://github.com/qbic-pipelines/bamtofastq
The project is aimed at resolving paralogs and split genes in phylogenetic trees.