Git Product home page Git Product logo

marmikreal / snakemake Goto Github PK

View Code? Open in Web Editor NEW

This project forked from snakemake/snakemake

0.0 0.0 0.0 89.31 MB

This is the development home of the workflow management system Snakemake. For general information, see

Home Page: https://snakemake.readthedocs.io

License: MIT License

Shell 0.12% JavaScript 0.80% Python 31.98% C 0.02% R 0.01% Rebol 0.01% Rust 0.07% Julia 0.01% CSS 0.06% Makefile 0.08% HTML 66.50% Jupyter Notebook 0.08% Dockerfile 0.03% Roff 0.01% Vim Script 0.10% Jinja 0.13%

snakemake's Introduction

Gitpod Ready-to-Code test status Sonarcloud Status Bioconda Pypi docker container status Stack Overflow Twitter Discord Github stars Contributor Covenant

Snakemake

The Snakemake workflow management system is a tool to create reproducible and scalable data analyses. Snakemake is highly popular, with on average more than 7 new citations per week in 2021, and almost 400k downloads. Workflows are described via a human readable, Python based language. They can be seamlessly scaled to server, cluster, grid and cloud environments without the need to modify the workflow definition. Finally, Snakemake workflows can entail a description of required software, which will be automatically deployed to any execution environment.

Homepage: https://snakemake.github.io

Copyright (c) 2012-2022 Johannes Köster [email protected] (see LICENSE)

snakemake's People

Contributors

johanneskoester avatar github-actions[bot] avatar percyfal avatar tomkinsc avatar stolpeo avatar rasmusagren avatar tbooth avatar vsoch avatar henningtimm avatar chrisburr avatar holtgrewe avatar dlaehnemann avatar marcelm avatar darwinawardwinner avatar bow avatar dependabot[bot] avatar epruesse avatar melund avatar yesimon avatar mbhall88 avatar boulund avatar felixmoelder avatar pvandyken avatar daler avatar dcroote avatar jfear avatar kemaleren avatar mdehollander avatar chrarnold avatar jayhesselberth avatar

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. 📊📈🎉

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google ❤️ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.