mannlabs / pydiaid Goto Github PK

Hi
I am confused about what the best input for py_diAID should be. Several ddaPASEF runs? It would not make sense to use diaPASEF runs. Since the precursors needed for the optimized are only those covered in original diaPASEF windows.

Thanks!
WeiQiang

Hi,

The latest of the release of the pyDIAid GUI version is very unstable. The cmd window vanishes if it idles even for 10 min. Also, I am struggling to cover most of the doubly and triply charged ions in a method. Do you have any suggestions for slope of the A1A2 and B1B2 line?

Thanks
Maithy

Hi

Every time I run the following command: 'pydiaid gui' in a bash terminal (Ubuntu), a server launches with a new port number . I just wonder, is there a way to set a specific port number for the server when it launches?

I am running pydiaid v.0.0.18 in a docker container so it would be convenient to map a port outside the container to a specific container port (the default port for the launched server).

Best,

Marc

Hi,

Could you please tell me how to specify more than modification from MaxQuant?

Thanks
Maithy

Hi,

Thanks for the nice tool. It would be great if py_diaid could use DIA-NN output as well.

Thanks
Maithy

Hey,

we would like to try out the pydiaid software using the example alphapep library mentioned in the documentation. However, we couldn't find that specified .csv file in the /static folder as stated. Any way you could include that or send in over for testing?

Best,
Thorben