estmeansd: Estimating the Sample Mean and Standard Deviation from Commonly Reported Quantiles in Meta-Analysis
The estmeansd
package implements the methods of McGrath et
al. (2020)
and Cai et
al. (2021)
for estimating the sample mean and standard deviation from commonly
reported quantiles in meta-analysis. Specifically, these methods can be
applied to studies that report one of the following sets of summary
statistics:
- S1: median, minimum and maximum values, and sample size
- S2: median, first and third quartiles, and sample size
- S3: median, minimum and maximum values, first and third quartiles, and sample size
Additionally, the Shiny app estmeansd implements these methods.
You can install the released version of estmeansd
from CRAN with:
install.packages("estmeansd")
After installing the devtools
package (i.e., calling
install.packages(devtools)
), the development version of estmeansd
can be installed from GitHub with:
devtools::install_github("stmcg/estmeansd")
Specifically, this package implements the Box-Cox (BC), Quantile
Estimation (QE), and Method for Unknown Non-Normal Distributions (MLN)
approaches to estimate the sample mean and standard deviation. The BC,
QE, and MLN methods can be applied using the bc.mean.sd()
qe.mean.sd()
, and mln.mean.sd()
functions, respectively:
library(estmeansd)
set.seed(1)
bc.mean.sd(min.val = 2, med.val = 4, max.val = 9, n = 100) # BC Method
#> $est.mean
#> [1] 4.210971
#>
#> $est.sd
#> [1] 1.337348
qe.mean.sd(min.val = 2, med.val = 4, max.val = 9, n = 100) # QE Method
#> $est.mean
#> [1] 4.347284
#>
#> $est.sd
#> [1] 1.502171
mln.mean.sd(min.val = 2, med.val = 4, max.val = 9, n = 100) # MLN Method
#> $est.mean
#> [1] 4.195238
#>
#> $est.sd
#> [1] 1.294908