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epiforbioworkshop2020

eurobioc2020

European Bioconductor Conference, December, 2020

findhomology

gdc-docs

Official repository for GDC User Guides in Markdown format

geneexpressionmetaanalysis

Analysis to accompany Gene Expression Meta-Analysis chapter

genomicranges

Representation and manipulation of genomic intervals and variables defined along a genome

genomicsupersignature

Interpretation of RNAseq experiments through robust, efficient comparison to public databases

h-hybridce

Hybrid Course Engagement data analysis

hackathon

Multi-omics studies are available here

introbiostat

Introduction to Biostatistics for Urban Public Health

labs

Rmd source files for the HarvardX series PH525x

levirmisc

Miscellaneous handy functions

lwaldron.github.io

mistakenidentities

A tool for correcting outdated, aliased, or otherwise invalid identifiers.

moonlightr

multiplatformgeosurvey

A short use case for GEOmetadb and dplyr

mungecuratedmgs

nothing

A package about nothing

padma

Pathway deviation scores using multiple factor analysis

pcaworkshop

A introduction to PCA in R

phyloseq

phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:

populationhealthinformaticschapter

princyr

GSEA of PCA, and eventually subtype finding

publicdataresources

The goal of this workshop is to introduce Bioconductor packages for finding, accessing, and using large-scale public data resources.

raggedexperiment

rangestutorial2017

Tutorial on the Ranges infrastructure given at Bioc 2017

rbootcamp2015

Materials for the Hunter / CUNY School of Public Health R Bootcamp 2015

rnw2rmd

rtcgatoolbox

simulatorz

conduct bootstrap simulation of a list of ExpressionSets