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License: GNU General Public License v3.0
PepTools - An Immunoinformatics (Immunological Bioinformatics) R-package for working with peptide data
License: GNU General Public License v3.0
I noticed in BLOSUM62_PROB.Rdata, M to L substitution has higher score than M to M. This is also true in the BLOSUM62 matrix from http://www.cs.cornell.edu/courses/cs626/2003sp/blosum62qij.txt.
For example, I was not able to generate the same image shown in the tutorial using the same peptide sequence.
"FIYRHMFCV" %>% pep_plot_images
Below is the generated image. Notice the score for substituting M_6 with L is the highest.
Is there a function to deal with DNA sequence like pep_encode
?
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