Helper Functions For Analysing KWB Endnote Library (Exported As .XML)
Home Page: http://kwb-r.github.io/kwb.endnote
License: MIT License
Helper Functions For Analysing KWB Endnote Library (Exported As .XML).
Helper Functions For Analysing KWB Endnote Library (Exported As .XML).
#install.packages("remotes", repos = "https://cloud.r-project.org")
remotes::install_github("KWB-R/kwb.endnote")Release: https://kwb-r.github.io/kwb.endnote
Development: https://kwb-r.github.io/kwb.endnote/dev
#install.packages("remotes")
#remotes::install_github("kwb-r/kwb.endnote@dev", upgrade = "never")
endnote_xml <- kwb.endnote::extdata_file("2020-06-17_KWB-documents.xml")
endnote_list <- kwb.endnote::create_endnote_list(endnote_xml)
endnote_df <- kwb.endnote::create_references_df(endnote_list)
rec_ids <- as.numeric(unlist(sapply(endnote_list, function(x) x$`rec-number`)))
missing_rec_ids <- !rec_ids %in% endnote_df$rec_number
if (any(missing_rec_ids)) {
print(rec_ids[missing_rec_ids])
tmp_list <- endnote_list[which(missing_rec_ids)]
str(tmp_list)
kwb.endnote::create_references_df(tmp_list)
}
#> [1] 515
#> List of 1
#> $ record:List of 16
#> ..$ database :List of 1
#> .. ..$ : chr "KWB-documents_20191205.enl"
#> .. ..- attr(*, "name")= chr "KWB-documents_20191205.enl"
#> .. ..- attr(*, "path")= chr "P:\\dms\\KWB-documents_20191205.enl"
#> ..$ source-app :List of 1
#> .. ..$ : chr "EndNote"
#> .. ..- attr(*, "name")= chr "EndNote"
#> .. ..- attr(*, "version")= chr "19.3"
#> ..$ rec-number :List of 1
#> .. ..$ : chr "515"
#> ..$ foreign-keys:List of 1
#> .. ..$ key:List of 1
#> .. .. ..$ : chr "515"
#> .. .. ..- attr(*, "app")= chr "EN"
#> .. .. ..- attr(*, "db-id")= chr "z90eszwadd95piezvwmxvr9z9ww9xssrfp5t"
#> ..$ ref-type :List of 1
#> .. ..$ : chr "47"
#> .. ..- attr(*, "name")= chr "Conference Paper"
#> ..$ contributors:List of 2
#> .. ..$ authors :List of 3
#> .. .. ..$ author:List of 1
#> .. .. .. ..$ style:List of 1
#> .. .. .. .. ..$ : chr "Remy, Christian"
#> .. .. .. .. ..- attr(*, "face")= chr "normal"
#> .. .. .. .. ..- attr(*, "font")= chr "default"
#> .. .. .. .. ..- attr(*, "size")= chr "100%"
#> .. .. ..$ author:List of 1
#> .. .. .. ..$ style:List of 1
#> .. .. .. .. ..$ : chr "Lesjean, Boris"
#> .. .. .. .. ..- attr(*, "face")= chr "normal"
#> .. .. .. .. ..- attr(*, "font")= chr "default"
#> .. .. .. .. ..- attr(*, "size")= chr "100%"
#> .. .. ..$ author:List of 1
#> .. .. .. ..$ style:List of 1
#> .. .. .. .. ..$ : chr "Siemers, Christoph"
#> .. .. .. .. ..- attr(*, "face")= chr "normal"
#> .. .. .. .. ..- attr(*, "font")= chr "default"
#> .. .. .. .. ..- attr(*, "size")= chr "100%"
#> .. ..$ secondary-authors: list()
#> ..$ titles :List of 2
#> .. ..$ title :List of 1
#> .. .. ..$ style:List of 1
#> .. .. .. ..$ : chr "Evaluation and optimisation of the environmental footprint of the Braunschweig sanitation concept with Life Cycle Assessment"
#> .. .. .. ..- attr(*, "face")= chr "normal"
#> .. .. .. ..- attr(*, "font")= chr "default"
#> .. .. .. ..- attr(*, "size")= chr "100%"
#> .. ..$ secondary-title:List of 1
#> .. .. ..$ style:List of 1
#> .. .. .. ..$ : chr "IWA World Congress on Water, Climate and Energy"
#> .. .. .. ..- attr(*, "face")= chr "normal"
#> .. .. .. ..- attr(*, "font")= chr "default"
#> .. .. .. ..- attr(*, "size")= chr "100%"
#> ..$ pages :List of 1
#> .. ..$ style:List of 1
#> .. .. ..$ : chr "20"
#> .. .. ..- attr(*, "face")= chr "normal"
#> .. .. ..- attr(*, "font")= chr "default"
#> .. .. ..- attr(*, "size")= chr "100%"
#> ..$ dates :List of 2
#> .. ..$ year :List of 1
#> .. .. ..$ style:List of 1
#> .. .. .. ..$ : chr "2012"
#> .. .. .. ..- attr(*, "face")= chr "normal"
#> .. .. .. ..- attr(*, "font")= chr "default"
#> .. .. .. ..- attr(*, "size")= chr "100%"
#> .. ..$ pub-dates:List of 1
#> .. .. ..$ date:List of 1
#> .. .. .. ..$ style:List of 1
#> .. .. .. .. ..$ : chr "13-18 May 2012"
#> .. .. .. .. ..- attr(*, "face")= chr "normal"
#> .. .. .. .. ..- attr(*, "font")= chr "default"
#> .. .. .. .. ..- attr(*, "size")= chr "100%"
#> ..$ pub-location:List of 1
#> .. ..$ style:List of 1
#> .. .. ..$ : chr "Dublin, Ireland"
#> .. .. ..- attr(*, "face")= chr "normal"
#> .. .. ..- attr(*, "font")= chr "default"
#> .. .. ..- attr(*, "size")= chr "100%"
#> ..$ abstract :List of 1
#> .. ..$ style:List of 1
#> .. .. ..$ : chr "This paper presents the results of an evaluation of the environmental footprint of the Braunschweig wastewater "| __truncated__
#> .. .. ..- attr(*, "face")= chr "normal"
#> .. .. ..- attr(*, "font")= chr "default"
#> .. .. ..- attr(*, "size")= chr "100%"
#> ..$ label :List of 1
#> .. ..$ style:List of 1
#> .. .. ..$ : chr "codigreen"
#> .. .. ..- attr(*, "face")= chr "normal"
#> .. .. ..- attr(*, "font")= chr "default"
#> .. .. ..- attr(*, "size")= chr "100%"
#> ..$ notes :List of 1
#> .. ..$ style:List of 1
#> .. .. ..$ : chr " "
#> .. .. ..- attr(*, "face")= chr "normal"
#> .. .. ..- attr(*, "font")= chr "default"
#> .. .. ..- attr(*, "size")= chr "100%"
#> ..$ urls :List of 1
#> .. ..$ pdf-urls:List of 2
#> .. .. ..$ url:List of 1
#> .. .. .. ..$ : chr "internal-pdf://0230639875/Remy-2012-515.pdf"
#> .. .. ..$ url:List of 1
#> .. .. .. ..$ : chr "internal-pdf://3553642818/Remy-2012-5152.pdf"
#> ..$ custom2 :List of 1
#> .. ..$ style:List of 1
#> .. .. ..$ : chr "CoDiGreen"
#> .. .. ..- attr(*, "face")= chr "normal"
#> .. .. ..- attr(*, "font")= chr "default"
#> .. .. ..- attr(*, "size")= chr "100%"
#> ..$ language :List of 1
#> .. ..$ style:List of 1
#> .. .. ..$ : chr "en"
#> .. .. ..- attr(*, "face")= chr "normal"
#> .. .. ..- attr(*, "font")= chr "default"
#> .. .. ..- attr(*, "size")= chr "100%"
#> # A tibble: 0 x 41
#> # ... with 41 variables: rec_number <dbl>, ref_type <dbl>, ref_type_name <chr>,
#> # year <chr>, title <chr>, title_secondary <chr>, title_tertiary <chr>,
#> # abstract <chr>, author_tertiary01 <chr>, author01 <chr>, author02 <chr>,
#> # author03 <chr>, authaddress <chr>, periodical_title_full <chr>,
#> # periodical_title_abbr <chr>, pages <chr>, volume <chr>, numvols <chr>,
#> # section <chr>, edition <chr>, pubdates <chr>, publisher <chr>,
#> # publocation <chr>, puborig <chr>, urls_pdf01 <chr>, urls_pdf02 <chr>,
#> # urls_related <chr>, electronic_resource_num <chr>, worktype <chr>,
#> # label <chr>, keyword01 <chr>, notes <chr>, caption <chr>, custom1 <chr>,
#> # custom2 <chr>, custom3 <chr>, custom7 <chr>, isbn <chr>, language <chr>,
#> # database_name <chr>, database_path <chr>
sessionInfo()
#> R version 4.0.0 (2020-04-24)
#> Platform: x86_64-w64-mingw32/x64 (64-bit)
#> Running under: Windows 10 x64 (build 18363)
#>
#> Matrix products: default
#>
#> locale:
#> [1] LC_COLLATE=German_Germany.1252 LC_CTYPE=German_Germany.1252
#> [3] LC_MONETARY=German_Germany.1252 LC_NUMERIC=C
#> [5] LC_TIME=German_Germany.1252
#>
#> attached base packages:
#> [1] stats graphics grDevices utils datasets methods base
#>
#> loaded via a namespace (and not attached):
#> [1] zip_2.0.4 Rcpp_1.0.4.6 pillar_1.4.4
#> [4] compiler_4.0.0 highr_0.8 forcats_0.5.0
#> [7] tools_4.0.0 kwb.utils_0.6.0 digest_0.6.25
#> [10] kwb.read_0.0.0.9000 evaluate_0.14 lifecycle_0.2.0
#> [13] kwb.endnote_0.1.0 tibble_3.0.1 gtable_0.3.0
#> [16] pkgconfig_2.0.3 rlang_0.4.6 openxlsx_4.1.5
#> [19] cli_2.0.2 yaml_2.2.1 xfun_0.14
#> [22] xml2_1.3.2 stringr_1.4.0 dplyr_1.0.0
#> [25] httr_1.4.1 knitr_1.28 htmlwidgets_1.5.1
#> [28] generics_0.0.2 vctrs_0.3.1 fs_1.4.1
#> [31] grid_4.0.0 tidyselect_1.1.0 glue_1.4.1
#> [34] kwb.file_0.3.1 R6_2.4.1 fansi_0.4.1
#> [37] rmarkdown_2.3 wordcloud2_0.2.1 tidyr_1.1.0
#> [40] ggplot2_3.3.1 purrr_0.3.4 magrittr_1.5
#> [43] scales_1.1.1 ellipsis_0.3.1 htmltools_0.5.0
#> [46] assertthat_0.2.1 colorspace_1.4-1 utf8_1.1.4
#> [49] stringi_1.4.6 munsell_0.5.0 crayon_1.3.4Created on 2020-06-19 by the reprex package (v0.3.0)
N checking R code for possible problems (9.5s)
write_references_df_to_xlsx : <anonymous>: no visible binding for
global variable ‘rec_number’
Undefined global functions or variables:
rec_number
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