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Hi I'm Cristal 🖥️ 🧬 🎲 🦄 🎮

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Cristal Villalba's Projects

osca icon osca

The package wrapping the book, for deployment via the Bioconductor build system.

picwoodpecker icon picwoodpecker

perl Tk program to choose among photos and copy one or more modified copy

python-redmine icon python-redmine

Python Redmine is a library for communicating with a Redmine project management application

reactionminer icon reactionminer

Tool to predict (bio)chemical reactions using graph mining.

remp icon remp

Github repository for REMP

rep_mps icon rep_mps

Analysis of Repetitive Elements in genes encoding Lysosomal Storage Disorders, specially MPS.

retrieveseq icon retrieveseq

RetrieveSeq is a GUI application that performs batch download of how many gene sequences you wish from Ensembl database. Mind you: this application is still under development. Our goal is to increase its functions, as well as provide more database options.

rmats-nf icon rmats-nf

A pipeline to retrieve RNA sequencing data from SRA, perform alignment with hisat2 and characterize splicing events with rMATS 3.2.5.

scanpy icon scanpy

Single-cell analysis in Python. Scales to >1M cells.

scrublet icon scrublet

Detect doublets in single-cell RNA-seq data

sicelore icon sicelore

Single Cell Long Read is a suite of tools dedicated to Cell barcode / UMI assignment and analysis of highly multiplexed single cell Nanopore long read sequencing data.

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