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Small Notebook to create fake fMRI results (for tutorial or class) - run it online at ->

Home Page: https://mybinder.org/v2/gh/miykael/create_fake_fmri_results/master

License: BSD 3-Clause "New" or "Revised" License

Python 0.38% Jupyter Notebook 99.62%

create_fake_fmri_results's Introduction

Create fake fMRI results

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This jupyter notebook allows you to create some fake fMRI results that you can use for a tutorial or class. The only thing that you have to do is to specify where you want to insert a fake cluster, the extent of such a cluster and the intenstiy (i.e. positive or negative).

Run it online in your browser

You can run the notebook directly on mybinder.org by clicking on the following button: Binder

Results

After running the notebook you will get figures, like the ones you see below, as well as peak information according to two probability atlases.

Glass brain view

Slice view

Orthogonal view at a specific location

Atlas information

Cluster 01
==========
  Size = 12819 voxels
  Peak Value: -0.84

Peak Information at [23.0, -99.0, 7.0]:
HarvardOxford                   63% Occipital_Pole
Juelich                         49% GM_Visual_cortex_V1_BA17_R
Juelich                         46% GM_Visual_cortex_V2_BA18_R
Juelich                         29% WM_Optic_radiation_R
Juelich                         19% GM_Visual_cortex_V3V_R

create_fake_fmri_results's People

Contributors

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