kingo233 / fct-pytorch Goto Github PK
View Code? Open in Web Editor NEWpytorch implementation for The Fully Convolutional Transformer(FCT)
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Can you tell me the environment setting version and data set configuration
Model weights
Hi kingo233!
When running your code with the same parameters and settings on the ACDC dataset using the official train/test split, I achieved a validation dice score of 0.7178 after 120 epochs. However, this result is significantly lower than the performance you reported. Do you have any insights into why this difference might occur? Additionally, could you please share the weights of your trained model? Thank you.
ACDC data after processing
Hello, could you share the processed ACDC data set? My email address is: [email protected]. Thank you very much.
问一下版本号
你好，请问一下import lightning 中lightning的版本是多少的呀
Requirements File
Hey kingo!
Do you have a requirements file at hand to make the installation easier? That would be awesome.
All the best,
Benedikt
Why does the loss of dice stay the same?
2023-03-09 12:21:47,350 | INFO | main.py:311 | -----------------------------------
2023-03-09 12:21:47,350 | INFO | main.py:312 | epoch: 197,train loss:0.091478,validate loss:0.091043,dice:0.256989,LV dice:0.008357,RV dice:0.030641,MYO dice:0.008357
2023-03-09 12:21:47,350 | INFO | main.py:315 | -----------------------------------
2023-03-09 12:25:06,750 | INFO | main.py:311 | -----------------------------------
2023-03-09 12:25:06,750 | INFO | main.py:312 | epoch: 198,train loss:0.091478,validate loss:0.091043,dice:0.256989,LV dice:0.008357,RV dice:0.030641,MYO dice:0.008357
2023-03-09 12:25:06,750 | INFO | main.py:315 | -----------------------------------
2023-03-09 12:28:26,582 | INFO | main.py:311 | -----------------------------------
2023-03-09 12:28:26,582 | INFO | main.py:312 | epoch: 199,train loss:0.091478,validate loss:0.091043,dice:0.256989,LV dice:0.008357,RV dice:0.030641,MYO dice:0.008357
2023-03-09 12:28:26,582 | INFO | main.py:315 | -----------------------------------
ACDC数据预处理
运行shutil.copy(d, join(out_folder, "imagesTr", patient_identifier + ".nii.gz"))这句代码的时候
报错 FileNotFoundError: [Errno 2] No such file or directory: 'Task027_ACDC\imagesTr\training\patient001\patient001_frame01.nii.gz'
提前在Task027_ACDC创建好文件，才不会出现这种错误，但100多个病人的数据，总不能一个一个创建吧，作者有解决的方法吗
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