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dbmi-report

deck-to-svg

Render DeckGL layers/views to SVG

dndscv

dN/dS methods to quantify selection in cancer and somatic evolution

dotfiles

.vimrc and stuff

explosig-v4

gehlenborglab-website

Code for Gehlenborg Lab website.

geotiff.js

geotiff.js is a small library to parse TIFF files for visualization or analysis. It is written in pure JavaScript, and is usable in both the browser and node.js applications.

gh-pages-test

hierzarrchy

Proposal: use Zarr to store multi-scale irregular ✕ regular and irregular² hierarchies

higlass

Fast large scale matrix visualization for the web.

higlass-register

Helper tool to register pluggable tracks

higlass-server

Server component for HiGlass that manages and serves tiled data

higlass-zarr-converters

Command line scripts to convert files to formats supported by a Zarr data fetcher plugin for HiGlass

histogram.gl

Create image channel histograms, powered by WebGL

infercms

Content management system that infers data types from database schema

irregular-plurals

Map of nouns to their irregular plural form

kataegis-scan-statistic

CMSC499A Spring 2018: Experimenting with scan statistics to identify kataegis

keep-a-changelog

If you build software, keep a changelog.

lasc234-monument

Final project for LASC234: digital humanities monument to Latin American mathematicians

lda.jl

Exercise in implementing the LDA variational inference algorithm

markk.co

Personal website

mudata

Multimodal Data (.h5mu) implementation for Python

muscat

Multi-sample multi-group scRNA-seq analysis tools

mutation-visualization

my-phillips-collection

my-phillips-collection-server

nanosaber-mcmicro

natcomms_kosig

NatComms_KOSig

nimfa

Nimfa: Nonnegative matrix factorization in Python

organotropism