@SaraAlthubaiti Yes, please run a new job on Chrome and the try Excel/Text buttons.

from open-cravat.

Hi @SaraAlthubaiti, we made a version with a fix. The installer package is at https://karchinlab.org/opencravat/installers/OpenCRAVAT.1.4.6.pkg. Can you try this version? (delete the OpenCRAVAT app, download and install this version, open OpenCRAVAT app, and try Excel/text button)

from open-cravat.

@SaraAlthubaiti I have not used TeamViewer yet, but I can try. Anytime from now is good. For any information not good to be written here, my email is [email protected].

from open-cravat.

Hi, /Applications/OpenCRAVAT.app/Contents/Resources/dummy.log is a bit strange, because normally that file is not created there. Can you give us some more details (steps taken until the exception occurred)?

from open-cravat.

Hello @rkiminsilico,
So after it finished running and it showed 'Launch' in the status, I tried to download that as Excel/text as provided but it showed me 'Error' in the status, and when I tried to investigate that in the log file I found this error that I post.

I repeat that (upload my file again and do that again), but when it finished; I tried to press 'Launch' but it opens a new window and keeps saying 'Retrieving data' for hours.

from open-cravat.

Hi @SaraAlthubaiti, thanks for your explanation. Can you let me know about the following questions? It is quite a few, but they would help us diagnosing the problem.

• How did you install OpenCRAVAT? Did you use the Mac installer of OpenCRAVAT?
• When do you launch OpenCRAVAT, which version do you see at the top right corner of the OpenCRAVAT tab on the browser? (1.4.4, 1.4.5, and etc)
• Which browser is launched after opening OpenCRAVAT? We recommend Chrome and Firefox. Safari may not support all the features of OpenCRAVAT. If you were using Safari, can you copy the URL of the OpenCRAVAT page and open it with Chrome or Firefox and see if everything is fine?
• How many variants were in your input file?
• Was the input file in the VCF format?
• Which annotators did you run?

from open-cravat.

Hello @rkiminsilico,

Yes sure,

• How did you install OpenCRAVAT? Did you use the Mac installer of OpenCRAVAT?

I used Mac installer and run it which opened a new web tab and then I start working.

• When do you launch OpenCRAVAT, which version do you see at the top right corner of the OpenCRAVAT tab on the browser? (1.4.4, 1.4.5, and etc)

Just I started using it yesterday, at the beginning, it was 1.4.4 but I had a problem which I asked about here: #15
and then it has been updated to 1.4.5 (it appears like this: Version: 1.4.4(1.4.5))

• Which browser is launched after opening OpenCRAVAT? We recommend Chrome and Firefox. Safari may not support all the features of OpenCRAVAT. If you were using Safari, can you copy the URL of the OpenCRAVAT page and open it with Chrome or Firefox and see if everything is fine?

Yes unfortunately, I'm using Safari; sure I will try now Chrome and see what will happen (I will back again to you after ~ 3 hours till my file finish).

How many variants were in your input file?

~ 4.5 million.

Was the input file in the VCF format?

Yes.

Which annotators did you run?

I run 3 annotators: Cancer Gene Census, COSMIC and CHASMplus.

from open-cravat.

Thanks @SaraAlthubaiti Please let us know when the job finishes (by the way, you can open the already-run job with Chrome without needing to run another job).

from open-cravat.

@rkiminsilico I tried now as you said to open the already-run job, but it's the same when I pres Excel/Text it shows error :(
Should I run again and see?

from open-cravat.

Hi again @rkiminsilico,

Unfortunately, the same error happens (this is when I tried Excel button and the same for text button the last few lines about PermissionError would repeated:

2019/07/23 20:18:19 cravat started: Tue Jul 23 20:18:19 2019
2019/07/23 20:18:19 cravat input assembly: hg38
2019/07/23 20:18:19 cravat.converter started: Tue Jul 23 20:18:19 2019
2019/07/23 20:18:19 cravat.converter input files: /Users/Shared/open-cravat/jobs/default/190723-201813/CosmicCodingMuts.vcf
2019/07/23 20:18:43 cravat.converter input format: vcf
2019/07/23 20:20:32 cravat.converter error lines: 0
2019/07/23 20:20:32 cravat.converter finished: Tue Jul 23 20:20:32 2019
2019/07/23 20:20:32 cravat.converter num input lines: 4668387
2019/07/23 20:20:32 cravat.converter runtime: 109.118
2019/07/23 20:20:32 cravat.mapper input file: /Users/Shared/open-cravat/jobs/default/190723-201813/CosmicCodingMuts.vcf.crv
2019/07/23 20:20:40 cravat.mapper mapper database: /Users/Shared/open-cravat/modules/mappers/hg38/data/hg38.sqlite
2019/07/23 20:20:40 cravat.mapper started: Tue Jul 23 20:20:40 2019
2019/07/23 20:21:47 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=N
2019/07/23 20:22:46 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=AAGAGGN
2019/07/23 20:30:07 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNN
2019/07/23 20:30:54 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 20:43:34 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNN
2019/07/23 20:43:34 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 20:43:34 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNN
2019/07/23 20:43:34 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 20:43:35 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 20:43:35 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 20:43:35 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNN
2019/07/23 20:43:35 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NN
2019/07/23 20:43:35 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 20:43:36 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNN
2019/07/23 20:44:22 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 20:44:23 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 20:44:24 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNN
2019/07/23 20:45:17 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 20:50:23 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNN
2019/07/23 20:50:23 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=AN
2019/07/23 20:50:23 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 20:51:39 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 20:56:03 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 20:56:03 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 21:01:31 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NCA
2019/07/23 21:09:18 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNN
2019/07/23 21:15:23 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 21:16:57 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNN
2019/07/23 21:19:43 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 21:20:50 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNN
2019/07/23 21:20:50 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNN
2019/07/23 21:20:50 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 21:20:53 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNN
2019/07/23 21:22:57 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 21:22:57 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNN
2019/07/23 21:22:58 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 21:22:58 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 21:22:58 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNN
2019/07/23 21:22:58 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNN
2019/07/23 21:26:39 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 21:26:40 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=GGNATG
2019/07/23 21:26:42 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 21:30:59 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNN
2019/07/23 21:46:17 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=CTGATCCTAGTACCTTCCCAAACTCTAAATTTTCTCTTGGAAACTCCCATTTGAGAN
2019/07/23 21:46:18 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 21:46:18 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=ATCCTAACGAGCGGNATTTTCTCTTGGAAACTCCCATTTGAGATCATATT
2019/07/23 21:46:18 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=CTCCTTGATACCCNAATTTTCTCTTGGAAACTCCCATTTGAGATCA
2019/07/23 21:46:18 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NA
2019/07/23 21:47:02 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 22:02:12 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 22:08:31 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 22:08:31 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 22:08:32 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 22:08:34 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNN
2019/07/23 22:08:34 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 22:08:35 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 22:08:36 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNN
2019/07/23 22:08:38 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 22:08:41 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 22:08:42 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 22:08:56 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 22:08:57 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNN
2019/07/23 22:19:34 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 22:21:01 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATT
2019/07/23 22:21:01 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 22:21:02 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 22:21:02 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 22:21:02 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=GCACCTTNA
2019/07/23 22:21:02 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=CTTCTGCTNA
2019/07/23 22:29:05 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 22:33:11 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNAA
2019/07/23 22:33:11 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 22:33:12 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=TGGCTGCAGCTNNN
2019/07/23 22:33:12 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NNNNNNNNNNNNNNNNNNNNNNNNNNNNN
2019/07/23 22:35:04 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 80, in map
raise InvalidData('alt='+crv_data['alt_base'])
cravat.exceptions.InvalidData: alt=NTG
2019/07/23 22:36:20 cravat.mapper finished: Tue Jul 23 22:36:20 2019
2019/07/23 22:36:20 cravat.mapper runtime: 8140.119
2019/07/23 22:36:20 cravat num_workers: 3
2019/07/23 22:36:20 cravat.cgc started: Tue Jul 23 22:36:20 2019
2019/07/23 22:36:20 cravat.cosmic started: Tue Jul 23 22:36:20 2019
2019/07/23 22:36:20 cravat.chasmplus started: Tue Jul 23 22:36:20 2019
2019/07/23 22:36:20 cravat.cgc finished: Tue Jul 23 22:36:20 2019
2019/07/23 22:36:20 cravat.cgc runtime: 0.424s
2019/07/23 22:38:06 cravat.cosmic Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_annotator.py", line 189, in run
output_dict = self.annotate(input_data)
File "/Users/Shared/open-cravat/modules/annotators/cosmic/cosmic.py", line 38, in annotate
elif len(rd['genename']) > len(primary_rd.get('genename','')):
TypeError: object of type 'int' has no len()
2019/07/23 22:51:00 cravat.cosmic finished: Tue Jul 23 22:51:00 2019
2019/07/23 22:51:00 cravat.cosmic runtime: 879.956s
2019/07/23 22:51:00 cravat.aggregator level: variant
2019/07/23 22:51:00 cravat.aggregator input directory: /Users/Shared/open-cravat/jobs/default/190723-201813
2019/07/23 22:51:32 cravat.aggregator started: Tue Jul 23 22:51:32 2019
2019/07/23 22:56:22 cravat.aggregator finished: Tue Jul 23 22:56:22 2019
2019/07/23 22:56:22 cravat.aggregator runtime: 289.432
2019/07/23 22:56:22 cravat.aggregator level: gene
2019/07/23 22:56:22 cravat.aggregator input directory: /Users/Shared/open-cravat/jobs/default/190723-201813
2019/07/23 22:56:22 cravat.aggregator started: Tue Jul 23 22:56:22 2019
2019/07/23 22:56:23 cravat.aggregator finished: Tue Jul 23 22:56:23 2019
2019/07/23 22:56:23 cravat.aggregator runtime: 0.812
2019/07/23 22:56:23 cravat.aggregator level: sample
2019/07/23 22:56:23 cravat.aggregator input directory: /Users/Shared/open-cravat/jobs/default/190723-201813
2019/07/23 22:56:38 cravat.aggregator started: Tue Jul 23 22:56:38 2019
2019/07/23 22:58:55 cravat.aggregator finished: Tue Jul 23 22:58:55 2019
2019/07/23 22:58:55 cravat.aggregator runtime: 137.737
2019/07/23 22:58:55 cravat.aggregator level: mapping
2019/07/23 22:58:55 cravat.aggregator input directory: /Users/Shared/open-cravat/jobs/default/190723-201813
2019/07/23 22:59:09 cravat.aggregator started: Tue Jul 23 22:59:09 2019
2019/07/23 23:01:09 cravat.aggregator finished: Tue Jul 23 23:01:09 2019
2019/07/23 23:01:09 cravat.aggregator runtime: 119.732
2019/07/23 23:01:13 cravat.tagsampler started: Tue Jul 23 23:01:13 2019
2019/07/23 23:09:36 cravat.tagsampler finished: Tue Jul 23 23:09:36 2019
2019/07/23 23:09:36 cravat.tagsampler runtime: 503.726
2019/07/23 23:09:37 cravat.vcfinfo started: Tue Jul 23 23:09:37 2019
2019/07/23 23:17:37 cravat.vcfinfo finished: Tue Jul 23 23:17:37 2019
2019/07/23 23:17:37 cravat.vcfinfo runtime: 480.503
2019/07/23 23:17:37 cravat finished: Tue Jul 23 23:17:37 2019
2019/07/23 23:17:37 cravat runtime: 10758.167s
2019/07/23 23:19:46 cravat started: Tue Jul 23 23:19:46 2019
2019/07/23 23:19:46 cravat input assembly: hg38
2019/07/23 23:19:46 cravat.excelreporter started: Tue Jul 23 23:19:46 2019
2019/07/23 23:19:46 cravat [Errno 13] Permission denied: '/Applications/OpenCRAVAT.app/Contents/Resources/dummy.log'
Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/cravat_class.py", line 673, in run_reporter
await reporter.run()
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/cravat_report.py", line 146, in run
await self.make_col_info(level)
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/cravat_report.py", line 348, in make_col_info
annot = annot_cls([mi.script_path, 'dummy'], {})
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_annotator.py", line 76, in init
self._log_exception(e)
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_annotator.py", line 80, in _log_exception
raise e
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_annotator.py", line 58, in init
self._setup_logger()
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_annotator.py", line 449, in _setup_logger
self._log_exception(e)
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_annotator.py", line 80, in _log_exception
raise e
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_annotator.py", line 438, in _setup_logger
log_handler = logging.FileHandler(self.log_path, 'a')
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/logging/init.py", line 1092, in init
StreamHandler.init(self, self._open())
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/logging/init.py", line 1121, in _open
return open(self.baseFilename, self.mode, encoding=self.encoding)
PermissionError: [Errno 13] Permission denied: '/Applications/OpenCRAVAT.app/Contents/Resources/dummy.log'
2019/07/23 23:19:46 cravat finished with an exception: Tue Jul 23 23:19:46 2019
2019/07/23 23:19:46 cravat runtime: 0.184s

from open-cravat.

Hello @rkiminsilico,

Sorry for keeping bothering you, I try the new version; no Error appeared but when I pressed Excel/Text it took a long time (~ an hour saying Generating) and then nothing been downloaded and Generating word goes, and this is what I got in the log file:
2019/07/25 10:34:14 cravat started: Thu Jul 25 10:34:14 2019
2019/07/25 10:34:14 cravat input assembly: hg38
2019/07/25 10:34:14 cravat.converter started: Thu Jul 25 10:34:14 2019
2019/07/25 10:34:14 cravat.converter input files: /Users/Shared/open-cravat/jobs/default/190725-103409/CosmicCodingMuts.vcf
2019/07/25 10:34:39 cravat.converter input format: vcf
2019/07/25 10:36:17 cravat.converter error lines: 0
2019/07/25 10:36:17 cravat.converter finished: Thu Jul 25 10:36:17 2019
2019/07/25 10:36:17 cravat.converter num input lines: 4668387
2019/07/25 10:36:17 cravat.converter runtime: 97.853
2019/07/25 10:36:17 cravat.mapper input file: /Users/Shared/open-cravat/jobs/default/190725-103409/CosmicCodingMuts.vcf.crv
2019/07/25 10:36:25 cravat.mapper mapper database: /Users/Shared/open-cravat/modules/mappers/hg38/data/hg38.sqlite
2019/07/25 10:36:25 cravat.mapper started: Thu Jul 25 10:36:25 2019
2019/07/25 10:37:37 cravat.mapper Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_mapper.py", line 168, in run
crx_data, alt_transcripts = self.map(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 81, in map
all_hits += self._get_coding_hits(crv_data)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 219, in _get_coding_hits
self._fill_coding_so(hit)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 309, in _fill_coding_so
self._fill_snv_pchange(hit)
File "/Users/Shared/open-cravat/modules/mappers/hg38/hg38.py", line 334, in _fill_snv_pchange
hit.aalt = cravat.translate_codon(hit.full_alt)
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/util.py", line 111, in translate_codon
return codon_table[bases]
KeyError
2019/07/25 12:44:59 cravat.mapper finished: Thu Jul 25 12:44:59 2019
2019/07/25 12:44:59 cravat.mapper runtime: 7713.488
2019/07/25 12:44:59 cravat num_workers: 3
2019/07/25 12:44:59 cravat.cgc started: Thu Jul 25 12:44:59 2019
2019/07/25 12:44:59 cravat.cosmic started: Thu Jul 25 12:44:59 2019
2019/07/25 12:44:59 cravat.chasmplus started: Thu Jul 25 12:44:59 2019
2019/07/25 12:44:59 cravat.cgc finished: Thu Jul 25 12:44:59 2019
2019/07/25 12:44:59 cravat.cgc runtime: 0.413s
2019/07/25 12:47:01 cravat.cosmic Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_annotator.py", line 189, in run
output_dict = self.annotate(input_data)
File "/Users/Shared/open-cravat/modules/annotators/cosmic/cosmic.py", line 38, in annotate
elif len(rd['genename']) > len(primary_rd.get('genename','')):
TypeError: object of type 'int' has no len()
2019/07/25 13:06:12 cravat.cosmic finished: Thu Jul 25 13:06:12 2019
2019/07/25 13:06:12 cravat.cosmic runtime: 1273.017s
2019/07/25 13:06:12 cravat.aggregator level: variant
2019/07/25 13:06:12 cravat.aggregator input directory: /Users/Shared/open-cravat/jobs/default/190725-103409
2019/07/25 13:07:06 cravat.aggregator started: Thu Jul 25 13:07:06 2019
2019/07/25 13:14:58 cravat.aggregator finished: Thu Jul 25 13:14:58 2019
2019/07/25 13:14:58 cravat.aggregator runtime: 471.279
2019/07/25 13:14:58 cravat.aggregator level: gene
2019/07/25 13:14:58 cravat.aggregator input directory: /Users/Shared/open-cravat/jobs/default/190725-103409
2019/07/25 13:14:58 cravat.aggregator started: Thu Jul 25 13:14:58 2019
2019/07/25 13:14:58 cravat.aggregator finished: Thu Jul 25 13:14:58 2019
2019/07/25 13:14:58 cravat.aggregator runtime: 0.827
2019/07/25 13:14:58 cravat.aggregator level: sample
2019/07/25 13:14:58 cravat.aggregator input directory: /Users/Shared/open-cravat/jobs/default/190725-103409
2019/07/25 13:15:15 cravat.aggregator started: Thu Jul 25 13:15:15 2019
2019/07/25 13:18:53 cravat.aggregator finished: Thu Jul 25 13:18:53 2019
2019/07/25 13:18:53 cravat.aggregator runtime: 218.336
2019/07/25 13:18:53 cravat.aggregator level: mapping
2019/07/25 13:18:53 cravat.aggregator input directory: /Users/Shared/open-cravat/jobs/default/190725-103409
2019/07/25 13:19:18 cravat.aggregator started: Thu Jul 25 13:19:18 2019
2019/07/25 13:22:33 cravat.aggregator finished: Thu Jul 25 13:22:33 2019
2019/07/25 13:22:33 cravat.aggregator runtime: 195.334
2019/07/25 13:22:38 cravat.tagsampler started: Thu Jul 25 13:22:38 2019
2019/07/25 13:37:47 cravat.tagsampler finished: Thu Jul 25 13:37:47 2019
2019/07/25 13:37:47 cravat.tagsampler runtime: 909.356
2019/07/25 13:37:47 cravat.vcfinfo started: Thu Jul 25 13:37:47 2019
2019/07/25 13:47:41 cravat.vcfinfo finished: Thu Jul 25 13:47:41 2019
2019/07/25 13:47:41 cravat.vcfinfo runtime: 593.308
2019/07/25 13:47:41 cravat finished: Thu Jul 25 13:47:41 2019
2019/07/25 13:47:41 cravat runtime: 11606.337s
2019/07/25 15:05:26 cravat started: Thu Jul 25 15:05:26 2019
2019/07/25 15:05:26 cravat input assembly: hg38
2019/07/25 15:05:26 cravat.excelreporter started: Thu Jul 25 15:05:26 2019
2019/07/25 15:45:23 cravat.excelreporter finished: Thu Jul 25 15:45:23 2019
2019/07/25 15:45:23 cravat.excelreporter runtime: 2397.119
2019/07/25 15:45:23 cravat finished: Thu Jul 25 15:45:23 2019
2019/07/25 15:45:23 cravat runtime: 2397.373s
2019/07/25 18:52:41 cravat started: Thu Jul 25 18:52:41 2019
2019/07/25 18:52:41 cravat input assembly: hg38
2019/07/25 18:52:41 cravat.textreporter started: Thu Jul 25 18:52:41 2019
2019/07/25 19:31:43 cravat.textreporter finished: Thu Jul 25 19:31:43 2019
2019/07/25 19:31:43 cravat.textreporter runtime: 2341.928
2019/07/25 19:31:43 cravat finished: Thu Jul 25 19:31:43 2019
2019/07/25 19:31:43 cravat runtime: 2342.001s

Which shows (as I understand everything is ok), but when I look that small window that pop-up when I run the app, is:

​###############################

Welcome to open-cravat!

###############################
OpenCRAVAT is served at 0.0.0.0:8060
(To quit: Press Ctrl-C or Ctrl-Break if run on a Terminal or Windows, or click "Cancel" and then "Quit" if run through OpenCRAVAT app on Mac OS)
Running converter...
Converter (converter) finished in 122.904s
Running gene mapper...
UCSC hg38 Gene Mapper (hg38) finished in 7721.592s
Running annotators...
cgc: started at Thu Jul 25 12:44:59 2019
cgc: finished at Thu Jul 25 12:44:59 2019
cgc: runtime 0.413s
An unexpected exception occurred.
multiprocessing.pool.RemoteTraceback:
"""
Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/multiprocessing/pool.py", line 121, in worker
result = (True, func(*args, **kwds))
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/multiprocessing/pool.py", line 47, in starmapstar
return list(itertools.starmap(args[0], args[1]))
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/mp_runners.py", line 13, in run_annotator_mp
annotator.run()
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_annotator.py", line 218, in run
self._log_exception(e)
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_annotator.py", line 80, in _log_exception
raise e
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_annotator.py", line 179, in run
self.base_setup()
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_annotator.py", line 281, in base_setup
self._log_exception(e)
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_annotator.py", line 80, in _log_exception
raise e
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_annotator.py", line 279, in base_setup
self.setup()
File "/Users/Shared/open-cravat/modules/annotators/chasmplus/chasmplus.py", line 14, in setup
with open(pval_path) as f:
FileNotFoundError: [Errno 2] No such file or directory: '/Users/Shared/open-cravat/modules/annotators/chasmplus/data/pvals.txt'
"""
The above exception was the direct cause of the following exception:
Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/cravat_class.py", line 744, in run_annotators_mp
for result in results.get():
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/multiprocessing/pool.py", line 657, in get
raise self._value
FileNotFoundError: [Errno 2] No such file or directory: '/Users/Shared/open-cravat/modules/annotators/chasmplus/data/pvals.txt'
multiprocessing.pool.RemoteTraceback:
"""
Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/multiprocessing/pool.py", line 121, in worker
result = (True, func(*args, **kwds))
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/multiprocessing/pool.py", line 47, in starmapstar
return list(itertools.starmap(args[0], args[1]))
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/mp_runners.py", line 13, in run_annotator_mp
annotator.run()
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_annotator.py", line 218, in run
self._log_exception(e)
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_annotator.py", line 80, in _log_exception
raise e
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_annotator.py", line 179, in run
self.base_setup()
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_annotator.py", line 281, in base_setup
self._log_exception(e)
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_annotator.py", line 80, in _log_exception
raise e
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/base_annotator.py", line 279, in base_setup
self.setup()
File "/Users/Shared/open-cravat/modules/annotators/chasmplus/chasmplus.py", line 14, in setup
with open(pval_path) as f:
FileNotFoundError: [Errno 2] No such file or directory: '/Users/Shared/open-cravat/modules/annotators/chasmplus/data/pvals.txt'
"""
The above exception was the direct cause of the following exception:
Traceback (most recent call last):
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/cravat_class.py", line 744, in run_annotators_mp
for result in results.get():
File "/Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/multiprocessing/pool.py", line 657, in get
raise self._value
FileNotFoundError: [Errno 2] No such file or directory: '/Users/Shared/open-cravat/modules/annotators/chasmplus/data/pvals.txt'
annotator(s) finished in 1273.200s
Running aggregator...
Variants finished in 525.462s
Genes finished in 0.936s
Samples finished in 234.587s
Tags finished in 458.546s
Running post-aggregators...
Tag Sampler (tagsampler) finished in 909.363s
VCF Info (vcfinfo) finished in 593.308s
Finished normally. Runtime: 11606.337s
Running reporter...
Excel Reporter (excelreporter) /Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/cravat_report.py:134: RuntimeWarning: coroutine 'Reporter.write_table_row' was never awaited
self.write_table_row(newrow)
RuntimeWarning: Enable tracemalloc to get the object allocation traceback
finished in 2397.138s
Finished normally. Runtime: 2397.373s
Running reporter...
Text Reporter (textreporter) /Applications/OpenCRAVAT.app/Contents/Resources/lib/python3.7/site-packages/cravat/cravat_report.py:134: RuntimeWarning: coroutine 'Reporter.write_table_row' was never awaited
self.write_table_row(newrow)
RuntimeWarning: Enable tracemalloc to get the object allocation traceback
finished in 2341.929s
Finished normally. Runtime: 2342.001s

So, I'm not fully sure of what happens, thanks for keeping help me but because I'm really interesting of trying this nice tool.

from open-cravat.

Hi @SaraAlthubaiti , sorry for your frustration. 1.4.6 is not an officially released version yet and thus can have some difficulty in figuring out which modules to update (it seems that the reporter modules for generating text and excel reports are for a different version of open-cravat). Can you try the below steps and let us know?

• Open Terminal.
• Execute cva install textreporter --version 1.0.2 and cva install excelreporter --version 1.0.2.
• Close and open OpenCRAVAT app again.
• Try excel/text buttons.

Also, was CHASMplus module installed normally? It seems that pval.txt was not found under chasmplus folder.

from open-cravat.

Hello @rkiminsilico,

The installation has been done, but you mean when I close OpenCRAVAT and re-open it; to did the analysis again? (upload the vcf file and so on?)
because if you mean the other option (close OpenCRAVAT and re-open it; the previous analysis still there but pressing Excel/Text works but give me empty file (nothing there))

was CHASMplus module installed normally? Yes, but I just check it, it shows that there is an update to be install in which I did just right now, so I think maybe I need to re-do the analysis, right?

from open-cravat.

@SaraAlthubaiti I meant the second option. This may save time in testing excel/text buttons: open OpenCRAVAT, click "tsv" button on the submit page (which will bring up a short sample variant list), run the job, and click excel or text button. If this works then excel/text buttons are working and thus the system will be ready for big jobs.

Also, if you prefer, we can have a quick screen share session, which may save time as I can take a look at what is going on with your system. If you want, let me know.

from open-cravat.

@rkiminsilico Yes please it's would be better and quicker if that's possible (is TeamViewer ok for you?)

from open-cravat.

@rkiminsilico OK perfect, I sent an email with the information you need for TeamViewer

from open-cravat.