kang-zhang Goto Github PK

1d-delta-model

1D delta model based on chp. 34 in Gary Parker's Ebook

2021_shrinivas_brenner_random_multiphase_fluids

Code accompanying paper titled "Phase separation in fluids with many interacting components" (2021)

a-trace-map-comparison-algorithm-for-the-discrete-fracture-network-models-of-rock-masses

A trace map comparison algorithm for the discrete fracture network models of rock masses

abaqus-elliptic-surface-crack-modeling

Abaqus elliptic surface crack modeling

auto07p

References, installation guide, and tutorial on "spatial pattern formation"

cheatsheets

RStudio Cheat Sheets

clfitzhugh-nagumo

A OpenCL implementation of the spatial Fitzhugh-Nagumo model

clgray-scott

OpenCL code to run the Gray-Scott model for chemical pattern formation

clmussels

OpenCL code for the musselbed self-organization model

clpredatorprey

Opencl code for a spatial predator-prey model exhibiting spiral waves.

crack-extract

Tool to extract cracks from 2D images, and quantify their geometry.

cracks

Java code that simulates the cracks that form when mud dries or paint cracks.

crystal-growth-rate-analysis

Python-based image processing scripts with an interactive GUI for extracting crystal growth rates from in situ microscopy images.

cudaaridlands

Cuda code for the Rietkerk model of spatial self-organisation of arid lands

data_code_jappecol

The

dendritic-crystal-growth

This repository contains MATLAB implementation for isotropic dendritic crystal growth as proposed by Kobayashi in "Modeling and numerical simulations of dendritic crystal growth"

dendriticcrystalgrowth

Dendritic Crystal Growth

dendrtitic-crystal-growth-kobayashi

This repository contains MATLAB implementation for isotropic and anisotropic dendritic crystal growth as proposed by Kobayashi in "Modeling and numerical simulations of dendritic crystal growth"

diatoms-motion-foraging

Supplementary movies for "Circular run-and-reversal motion optimizes foraging behavior in benthic diatoms" by Wensi Hu, Mingji Huang, H. P. Zhang, Feng Zhang, Wim Vyverman, Quan-Xing Liu for peer review.

ecomodelmarkdowns

Stand alone markdowns with embedded shiny apps for various eco&epi models

fairy-circles-patterns-on-saltmarshes

This code for "Fairy circles imply high resilience of self-organized salt marshes" by Li-Xia Zhao, Quan-Xing Liu, Koen Siteur, Xiu-Zhen Li and Johan van de Koppel. The codes were implemented on anaconda platform with pyopencl package and Jupyter.

fast-marching-image-segmentation

Image segmentation method based on the fast marching method

fem2d-cracks

fish-patterns

gtc2017-numba

Numba tutorial for GTC 2017 conference

gtc2018-numba

Numba tutorial for GTC 2018

insect-wing-venation-patterns

Code corresponding to the manuscript "A simple developmental model recapitulates complex insect wing venation patterns" PNAS 2018

intel_hpc_2016_numba_tutorial

Numba tutorial materials for Intel HPC conference, November 2016

kpz

Study of the dynamics of the Kibble-Zurek mechanism in polariton condensates using the compact Kardar-Parisi-Zhang equation

kpz_equation

Scripts in Matlab to simulate the KPZ equation and calculate its critical exponents. Don't forget to cite it properly!