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espresso's Issues

h5md test fails with boost 1.58 under ubuntu xenial

#0 0x00007ffff7825428 in __GI_raise (sig=sig@entry=6) at ../sysdeps/unix/sysv/linux/raise.c:54
#1 0x00007ffff782702a in __GI_abort () at abort.c:89
#2 0x00007ffff78677ea in __libc_message (do_abort=do_abort@entry=2,
fmt=fmt@entry=0x7ffff7980e98 "*** Error in `%s': %s: 0x%s ***\n")
at ../sysdeps/posix/libc_fatal.c:175
#3 0x00007ffff7874698 in malloc_printerr (ar_ptr=0x0, ptr=,
str=0x7ffff7980ec0 "munmap_chunk(): invalid pointer", action=) at malloc.c:5006
#4 munmap_chunk (p=) at malloc.c:2842
#5 __GI___libc_free (mem=) at malloc.c:2963
#6 0x00007fffe78f79aa in Writer::H5md::File::InitFile (this=0xa3f910)
at /home/espresso/espresso/src/core/io/writer/h5md/h5md_core.cpp:118
#7 0x00007ffff38c5e24 in ScriptInterface::Writer::H5mdScript::call_method (this=0x3d3ff70,
name="init_file", parameters=std::map with 0 elements)
at /home/espresso/espresso/src/script_interface/h5md/h5md.cpp:34
#8 0x00007ffff3891f53 in ScriptInterface::ParallelScriptInterface::call_method (this=0x3d0d8f0,
name="init_file", parameters=std::map with 0 elements)
at /home/espresso/espresso/src/script_interface/ParallelScriptInterface.cpp:126
#9 0x00007fffe6326a2a in __pyx_pf_10espressomd_16script_interface_16PScriptInterface_12call_method
(__pyx_v_self=0x7fffe58c1fa8, __pyx_v_method=0x7fffe5a48de0, __pyx_v_kwargs=0x7fffe5855e88)
at /home/espresso/espresso/build/src/python/espressomd/script_interface.cpp:2475
#10 0x00007fffe6325c4d in __pyx_pw_10espressomd_16script_interface_16PScriptInterface_13call_method
(__pyx_v_self=0x7fffe58c1fa8, __pyx_args=0x7fffe58ca910, __pyx_kwds=0x0)
at /home/espresso/espresso/build/src/python/espressomd/script_interface.cpp:2343

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