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cc21fall2's Introduction

:octocat: A Guide to my GitHub Repos

๐Ÿ“ฆ Packages

ggformat -- RStudio add-in to pretty up your ggplot2 code

redav -- two useful functions: one for plotting biplots and the other for plotting missing values. More to come.

wonderapi -- facilitates calling the CDC Wonder API from R to import data

๐Ÿ“š Online Books

D3 for R Users source code

R Dataset Guide -- provides info about number and type of variables in built-in datasets, helpful for creating exercises or lecture examples source code

๐ŸŽจ Other Useful Stuff

syntax -- Quarto syntax highlighting theme examples (plus the option to create your own!)

๐Ÿง‘โ€๐Ÿซ Course Resources

1201 -- source code for 1201.info

edav2 -- source code for edav.info

๐Ÿ—๏ธ Quarto Templates

quarto-edav-template -- template for creating a Quarto book in RStudio, published on GitHub Pages for EDAV final project Video tutorial

website-template -- template for creating a Quarto web site in RStudio, published on GitHub Pages Video tutorial

๐Ÿ—๏ธ Bookdown Templates (outdated, Quarto recommended instead)

bookdown-template -- general bookdown template, to get started see How to create a bookdown book in 5 minutes

EDAVtemplate -- template for Exploratory Data Analysis and Visualization class

IMLVtemplate -- template for Interpretable Machine Learning w/ Visualization class

๐Ÿงฐ Workshop Materials

csp2024 -- CSP: Effective Graphs with ggplot2 (New Orleans, 2024)

sdss2023 -- SDSS: Effective Graphs with ggplot2 (St. Louis, 2023)

nycasa -- ASA NYC Metro: Exploratory Data Analysis with R (2023)

pkgdev -- RForwards: R Package Development Workshop (2022)

graphcat21 -- Graphing Multivariate Categorical Data in R (with Ludmila Janda) (2021)

graphcat -- useR2021: Graphing Multivariate Categorical Data in R (with Ludmila Janda) (2021)

panelplots -- ASA NYC Metro: Panel Plots (with Naomi Robbins) (2019)

BRL-workshops -- Columbia BRL: EDA / Data Transformation (2019)

RLadies -- RLadies NYC: purrr (2018), heatmaps (2017)

cc21fall2's People

Contributors

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cc21fall2's Issues

Issue on bookdown

I see an issue on the bookdown run - it appears to be emanating from dataframe_operation_tutorial.Rmd. Possibly b/c the resources folder is not correctly tagged (it has a different name) or the path is wrong. The weird thing is it seems the commit was 10 days ago, so presumably it was running for a while I cannot find the pull request or merge (or anything but the initial commit). Any ideas where to look? @jtr13

Issue on run #204

quitting from lines 45-49 (running_sql_queries_on_dataframes.Rmd)
Error: Error in fun(environment()) : invalid first argument
Calls: local ... call_block -> -> lazyLoad -> lazyLoadDBexec -> fun
Execution halted
Error in Rscript_render(f, render_args, render_meta, add1, add2) :
Failed to compile running_sql_queries_on_dataframes.Rmd
Calls: -> render_new_session -> Rscript_render
Execution halted
Error: Process completed with exit code 1.

Add API tokens to secrets

Chapters that require API tokens to build will not work unless we add the tokens to GitHub secrets and access them in GitHub actions. For now code chunks are set to eval=FALSE in https://jtr13.github.io/cc21fall2/scrape-twitter-data-using-r.html to circumvent this problem.

@rjr2168 developed a workflow for https://jtr13.github.io/cc21fall2/video-introduction-to-maps-with-ggmap.html using this method which we can use as a model if other authors are interested in going this route.

If you set eval=FALSE for other chapters for the same reason, please add a reference to those chapters in this thread.

Data files missing for urca chapter

GA fails trying to open files: https://github.com/jtr13/cc21fall2/actions/runs/3278238957/jobs/5396410329#step:8:2845 and
https://github.com/jtr13/cc21fall2/actions/runs/3278238957/jobs/5396410329#step:8:2849 in this chapter:

https://jtr13.github.io/cc21fall2/urca-unit-root-test-and-cointegration-test.html

@yzh9810 If you can make the eth-usdt.csv files available either on another external site or in a resources folder, we can change eval to true for all code chunks.

Issue in use_python_in_r.Rmd

Hi Professor @jtr13,

I missed out on this, other files are done. Last time for a RMD file I forgot to update it in the bookdown.yml and merged the file, I had asked you on what can be done, you suggested me to update the bookdown.yml on the main bookdown. But I forgot doing that, now I have updated in bookdown file, I am getting the following error, could you please help me out.

https://github.com/jtr13/cc21fall2/actions/runs/1517467763
Error: Process completed with exit code 1.

Failing on dependencies

I'm a bit at a loss why we're failing now - I pushed a new request through that just fixed some typos - seems to be a problem with the dependencies but v. difficult to diagnose. Looks like there is a page error somewhere but not sure how to track down. Not sure what the fix is without just going through and trying to find if it is a specific package in question (could also be a remote system issue I guess). Very speculative from me unfort.

Execute Python code

There are a number of chapters which are causing the build to fail since they have Python code. The code works locally but not in the build environment because we don't have Python installed. Adding a Python installtion to our GitHub actions script would be a start, but we'd also need to make sure that reticulate is able to find it. For now the code chunks are set to eval=FALSE so the build will pass.

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