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pygbe

PyGBe: Python, GPUs and Boundary elements for electrostatics

pymol-script-repo

Collected scripts for Pymol

pyrosetta.notebooks

Jupyter Notebooks for learning the PyRosetta platform for biomolecular structure prediction and design

python

Day-wise Python Learning resources from basic concepts to advanced Python applications such as data science and Machine learning. It also includes cheat-sheets, references which are logged daily to accelerate your learning.

pytorch-lightning

The lightweight PyTorch wrapper for high-performance AI research. Scale your models, not the boilerplate.

r-net-in-keras

R-NET implementation in Keras.

regals

SAXS deconvolution by REGularized Alternating Least Squares (REGALS)

robinhoodbot

Trading bot for Robinhood accounts

robinhoodshell

A command line shell for trading stocks using Robinhood

russian

sdeflow-light

A minimalist implementation of score-based diffusion model

self-guided-alps-and-related-benchmarks

simple_modeller

Couple of scripts for running modeller given a 2 sequence fasta alignment

starter-hugo-academic

🎓 Hugo Academic Theme 创建一个学术网站. Easily create a beautiful academic résumé or educational website using Hugo, GitHub, and Netlify.

string-method-gmxapi

An implementation of the string method using GROMACS' python API

string2go

Protein function prediction based on protein-protein interaction network topology and deep maxout neural networks

stumpy

STUMPY is a powerful and scalable Python library for computing a Matrix Profile, which can be used for a variety of time series data mining tasks

sudeepraja.github.io

Build a Jekyll blog in minutes, without touching the command line.

tacoxdna

A collection of tools for DNA modelling

testingtesting

testingtesting_prep

the-4th-symposium-on-biophysics-postgraduate-research-in-hong-kong

torch-householder

Efficient Householder Transformation in PyTorch

torchproteinlibrary

PyTorch library of layers acting on protein representations

umap

Uniform Manifold Approximation and Projection

visualize-normalizations

Images as seen under different normalizations

windowslaptopsetup

Optimal Set Up of a Windows Laptop