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2018lptcin

alphashape3d

The package alphashape3d presents the implementation in R of the alpha-shape of a finite set of points in the three-dimensional space.

analysissuite

R Neuron Analysis Suite provides functions to read/write/analyse neuroanatomical data

analysissuitebin

These are additional perl/shell scripts that are intended to support my AnalysisSuite package

antsr

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antsrcore

C++ core supporting ANTsR.

bigneuronimperial

Some analysis associated with the BigNeuron hackathon at Imperial College Jan 2016

bioanalyzer

bmp

A simple R package to read Windows BMP format images

brainbaser

Programmatic Access to the Brainbase Drosophila Neuroanatomy Website

brrr

Rap adlibs in R.

cachem

Key-value caches for R

catmaid

Collaborative Annotation Toolkit for Massive Amounts of Image Data

catmaid-to-blender

Plugin for Blender to interface with CATMAID Server and Pull Data

catnat

cmtk

Unofficial git clone of Computational Morphometry Toolkit (CMTK)

cmtkr

R wrapper package for the Computational Morphometry Toolkit (CMTK)

cnmf_e

Constrained Nonnegative Matrix Factorization for microEndoscopic data

colormip_mask_search

ColorMIP_Mask_Search plugin for Fiji

covr

Test coverage reports for R

dash

RStudio Addin to Run a Selection as a Background Job

datapackage

An R package to handle data packages

deformetricar

R wrapper for deformetrica registration tool

dendextend

R package

dendroextras

Extra functions to cut, label and colour dendrogram clusters

devtools

Tools to make an R developer's life easier

door.functions

R package containing the functions used to build the Database of Odor Responses

dplyr

Plyr specialised for data frames: faster & with remote datastores

drat

test how to setup drat

drosadultbraindomains

Drosophila Adult Brain Domains