jefferis Goto Github PK

emsampling

Experimental functions to analyse EM connectomics data

ercawards

euref2petition

Data and code to analyses the EU 2nd referendum petition (http://petition.parliament.uk/petitions/131215)

fafbsegdata

Additional version data to accompany fafbseg data

fiji-cmtk-gui

Simple GUI frontend for CMTK image registration tools in Fiji/ImageJ

filehash

The 'filehash' package for R

fluorender

FluoRender is an interactive rendering tool for confocal microscopy data visualization.

flylight

Functions for working with Janelia FlyLight confocal images

flynblastscores

R package to provide RESTful interface via opencpu to NBLAST scores for fly neurons

fmfio

R package to read the 'FlyMovieFormat' (fmf) video format

frulhns

R package frulhns to accompany "A bidirectional circuit switch reroutes pheromone signals in male and female brains"

gala

Automatic segmentation of electron microscopy volumes

ggbeeswarm

Column scatter / beeswarm-style plots in ggplot2

git2r

R bindings to the libgit2 library

gold_trainingsubset_79_all

BigNeuron gold training set + initial automated reconstructions.

gphys

R package to analyse electrophysiology data acquired by Neuromatic / Igor Pro

gscraper

Basic web scraping - designed to generate local cache of remote website

httr

httr: a friendly http package for R

hxnrrdio

a library for Amira 3d Visulisation Software to read/write data in the Nrrd Image format

igorr

R package to load Igor Pro waves (ibw) and experiment files (pxp) in R

imager

R package for image processing

io

jefferis.github.io

user level github pages site

jsonlite

A Robust, High Performance JSON Parser and Generator for R

kohl2015latex

Latex version of Current Opinion article written by Kohl, Huoviala and Jefferis.

lazyeval

A strategy for doing non-standard evaluation (NSE) in R

libnabo

A fast K Nearest Neighbor library for low-dimensional spaces

libneuroml

This package provides Python libNeuroML, for working with neuronal models specified in NeuroML

lreg

What the package does (short line)

manifoldreduction

Manifold Dimension Reduction after Chigirev and Bialek