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Mojo shouldn't add output directory to source roots and test-source roots

The mojo currently adds the output directory to both the source roots and 
test-source roots.  It it happens to be a source root, this is good.  
Otherwise, it's not.

In my particular case, I am generating some test sources.  Mistakenly marking 
them as (non-test) sources puts them in production jars, breaks Cobertura 
through interaction with a different bug there, etc...

I'd suggest adding a boolean parameter to control this behavior.  Less 
desirably strip it altogether and require use of build-helper.

Original issue reported on code.google.com by [email protected] on 1 Jun 2011 at 4:21

Transitive dependencies should not be changed and re-published

I found I couldn't build my project, because maven couldn't find org.freemarker 
2.3.20. Maven actually complains about all the plugins you use but don't 
specify a version of, but if authors of plugins just change their dependencies 
and re-publish the same version again - your build changes, even though you did 
your best to prevent it.

Don't ever do this - increment the version and publish that.

Original issue reported on code.google.com by [email protected] on 30 Aug 2013 at 9:32

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