Comments (3)
Thanks for this idea. I've gone ahead and implemented it in the latest version 1.1.21 (both weighted views and observed/unobserved). For the moment I've just got the exact solution (i.e. directly changing the eigenvalue problem). I should be able to improve efficiency in the future by making a version that uses alternating least squares solvers + need to update the docs so will leave this open.
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This particular case should now work by using GCCA().fit(view1,view2,...,view_n, view_weights=view_weights, K=K) where view_weights is an array with one weight for each view and K is an array with (n,N) where n is the number of views and N is the total number of samples and its entries are 1 or 0 depending if that sample is observed for that view
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small edit - slightly changed the way methods are built and constructed so the above is now GCCA(view_weights=view_weights, K=K).fit(view1,view2,...,view_n)
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Related Issues (20)
- cca_zoo.models.GRCCA.fit's keyword-argument group should default to single-feature groups HOT 2
- cca_zoo.models.GRCCA.fit(groups) does not work together with cca_zoo.model_selection.GridSearchCV.fit(groups) HOT 8
- cca_zoo.model_selection.GridSearchCV does not work when estimator has more than one latent dimension and scorer function is not provided HOT 1
- How to install the deep learning component? HOT 11
- GRCCA: Checking on feature groups fails for feature groups with np.int8 HOT 2
- question about MCCA HOT 3
- torch error while trainning DCCA and DCCAE HOT 2
- Why we have to conduct linear cca before we count the score of projected embedding? HOT 6
- Documentation of penalty parameter ranges? HOT 1
- why the performance of CCA and MCCA is different when I use them to project two views? HOT 9
- GRCCA gives quite different results with original implementation HOT 9
- The cca loss of two irrelevant dataset is -20. HOT 13
- The DCCA loss of two equal view is -6 (dim=100). HOT 12
- when run "python plot_dcca.py" error occurs HOT 2
- problem of latent_dims setting of DCCA_EigenGame HOT 9
- the problem of the model.transform() HOT 4
- Problems encountered when using DCCA.fit
- Pass down parameters to BaseSearchCV in cca_zoo.model_selection.GridSearchCV
- the value of the model.fit_transform() is nan HOT 7
- Could you provide a 3-group CCA method? HOT 2
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