The following table displays a list of genetic variants obtained from the input file. Each variant is associated with specific information such as chromosome, start position, allele ID, reference allele (Ref.), alternative allele (Alt.), and the corresponding OMIM ID (Online Mendelian Inheritance in Man).
This data is extracted from a XML file using a parsing script. The purpose of this script is to identify and retrieve relevant information about genetic variants and their associated OMIM IDs.
The input file used for parsing the variants is input_file.txt
. It contains the following variants:
chr | start | alleleID | Ref. | Alt. |
---|---|---|---|---|
1 | 1273909 | 359205 | G | GGCATTGGC |
1 | 1167897 | 442612 | G | A |
1 | 986689 | 495050 | C | CT |
... (remaining variants) |
The parsed variants are matched with their corresponding OMIM IDs, resulting in the following table:
chr | start | alleleID | Ref. | Alt. | OMIM ID |
---|---|---|---|---|---|
1 | 1273909 | 359205 | G | GGCATTGGC | 300912 |
1 | 1167897 | 442612 | G | A | 176270 |
1 | 986689 | 495050 | C | CT | 616580 |
... (remaining variants) |