Git Product home page Git Product logo

stax_omim_opti_2's Introduction

stax_omim_opti_2

Variant Data

The following table displays a list of genetic variants obtained from the input file. Each variant is associated with specific information such as chromosome, start position, allele ID, reference allele (Ref.), alternative allele (Alt.), and the corresponding OMIM ID (Online Mendelian Inheritance in Man).

This data is extracted from a XML file using a parsing script. The purpose of this script is to identify and retrieve relevant information about genetic variants and their associated OMIM IDs.

Input Data

The input file used for parsing the variants is input_file.txt. It contains the following variants:

chr start alleleID Ref. Alt.
1 1273909 359205 G GGCATTGGC
1 1167897 442612 G A
1 986689 495050 C CT
... (remaining variants)

Output Data

The parsed variants are matched with their corresponding OMIM IDs, resulting in the following table:

chr start alleleID Ref. Alt. OMIM ID
1 1273909 359205 G GGCATTGGC 300912
1 1167897 442612 G A 176270
1 986689 495050 C CT 616580
... (remaining variants)

stax_omim_opti_2's People

Contributors

iquxle avatar

Watchers

 avatar

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    ๐Ÿ–– Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. ๐Ÿ“Š๐Ÿ“ˆ๐ŸŽ‰

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google โค๏ธ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.