Git Product home page Git Product logo

tangram_plipgui's People

Contributors

jaimergp avatar unixjunkie avatar

Stargazers

 avatar  avatar  avatar  avatar

Watchers

 avatar  avatar  avatar

tangram_plipgui's Issues

My trial at installing this...

sudo apt install python2.7-openbabel
pip install plip
pip install https://github.com/insilichem/libtangram/archive/v0.0.2.zip
pip install https://github.com/insilichem/tangram_plipgui/archive/v0.0.2.zip

Then, when I launch chimera:

Error while importing plipgui from /home/berenger/.local/lib/python2.7/site-packages:
Traceback (most recent call last):
  File "/home/berenger/usr/chimera-1.13/share/chimera/extension/base.py", line 351, in _importExtension
    __import__(module)
  File "/home/berenger/.local/lib/python2.7/site-packages/plipgui/ChimeraExtension.py", line 8, in <module>
    from plipgui.core import cmd_plip, cmd_unplip
  File "/home/berenger/.local/lib/python2.7/site-packages/plipgui/core.py", line 50, in <module>
    from plip.modules.preparation import PDBComplex
  File "/home/berenger/.local/lib/python2.7/site-packages/plip/modules/preparation.py", line 13, in <module>
    from .detection import *
  File "/home/berenger/.local/lib/python2.7/site-packages/plip/modules/detection.py", line 12, in <module>
    from .supplemental import *
  File "/home/berenger/.local/lib/python2.7/site-packages/plip/modules/supplemental.py", line 27, in <module>
    from pybel import *
TypeError: Item in ``from list'' must be str, not unicode

If, out of despair, I try to install

pip install https://github.com/insilichem/libtangram/archive/v0.0.3.zip
pip install https://github.com/insilichem/tangram_plipgui/archive/v0.0.3.zip

Then the chimera error upon startup become:

Traceback (most recent call last):
  File "/home/berenger/usr/chimera-1.13/share/chimera/extension/base.py", line 351, in _importExtension
    __import__(module)
  File "/home/berenger/.local/lib/python2.7/site-packages/plipgui/ChimeraExtension.py", line 8, in <module>
    from plipgui.core import cmd_plip, cmd_unplip
  File "/home/berenger/.local/lib/python2.7/site-packages/plipgui/core.py", line 50, in <module>
    from plip.modules.preparation import PDBComplex
ImportError: No module named plip.modules.preparation

So, in both cases, I don't get the tangram-plip GUI installed into my chimera...
:(

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    ๐Ÿ–– Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. ๐Ÿ“Š๐Ÿ“ˆ๐ŸŽ‰

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google โค๏ธ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.