Name: Jan Eglinger
Type: User
Company: Friedrich Miescher Institute for Biomedical Research (FMI)
Bio: Bio-Image Analyst / Image Data Scientist in the Facility for Advanced Imaging and Microscopy at FMI Basel
Twitter: jan_eglinger
Location: Basel, Switzerland
Hi, I'm Jan Eglinger, image data scientist and bio-image analyst at the Friedrich Miescher Institute for Biomedical Research (FMI), Basel (Switzerland).
📫 Please contact me via the image.sc forum
register_virtual_stack_slices
Fiji plugin for registering arbitrarily large sequences of images
render-python
A python interface for render
run_jython_scripts_from_ide
sandbox
sbemimage
Versatile acquisition software for serial block-face electron microscopy
scenery
Flexible VR Visualisation for Volumetric and Geometric Data on the Java VM, powered by Kotlin and Vulkan
scifio
SCientific Image Format Input & Output: a flexible, extensible framework for image I/O. *EXPERIMENTAL* All API is subject to change, so depend at your own risk! See also @openmicroscopy/bioformats.
scifio-hdf5
SCIFIO format plugins for reading and writing HDF5 data.
scifio-javacv
JavaCV bindings for SCIFIO so it can read all those movies
scijava-scripts
Shell scripts for scientific projects written in Java
scijava-ui-swing
SciJava UI components for Java Swing.
scikit-image
Image processing in Python
sciview
SciView is an ImageJ/FIJI plugin for visualization and interaction with 3D data
sciview-i2k-plugin
Trying out sciview plugin development
sciview-update-sites
The buttercup update site for sciview
scripting-beanshell
JSR-223-compliant BeanShell scripting plugin
scripts
Home of IJ BAR: A collection of Broadly Applicable Routines for ImageJ
snt
The ImageJ framework for semi-automated tracing and analysis of neurons
spikefinder-elephant
Keras network for spike detection from calcium traces
spim_registration
Software for the reconstruction of multi-view microscopic acquisitions like Selective Plane Illumination Microscopy (SPIM) Data
ssi-code
Image Deconvolution via Noise-Tolerant Self-Supervised Inversion
stack_manipulation
starfish
starfish: unified pipelines for image-based transcriptomics
steerable3d
An ImageJ plugin steerable filter based on 3D Gaussian derivatives
superset
Superset is a data exploration platform designed to be visual, intuitive, and interactive
syntaxhighlighter
teaching-dl-course-2020
EMBL Deep Learning course 2020-21 exercises and materials
test
test-menu-path
tracker-commons
Compilation of information and code bases related to open-source trackers for C. elegans
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
Django
The Web framework for perfectionists with deadlines.
Laravel
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
Microsoft
Open source projects and samples from Microsoft.
Google
Google ❤️ Open Source for everyone.
Alibaba
Alibaba Open Source for everyone
D3
Data-Driven Documents codes.
Tencent
China tencent open source team.
