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climate_change_cities's Introduction

Hello!

About me

I'm Irene Aguerri. I'm a Geospatial Data Engineer. I have studies in Forestry, GIS, and Data Analytics and I like Geoinformatics. I want to merge data, environmental and social impact.

Now I'm working at INDRA as Geodata Analyst developing a Transport Application with OSM Data for Spanish cities

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Data Science & Analytics

📚 Frameworks, Platforms and Libraries and Language

Anaconda NumPy Pandas Plotly scikit-learn Git

📋 Languages

Python

Visualization

Power Bi

Front-end and Web Development

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📋 Languages

JavaScript HTML5

💾 Databases

Firebase MongoDB MySQL Postgres Supabase

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climate_change_cities's Issues

`environment.yml` is OS-specific

I tried recreating the conda environment with micromamba on Linux, but unfortunately it's failing to locate some packages:

$ micromamba create -f environment.yml -n climate

                                           __
          __  ______ ___  ____ _____ ___  / /_  ____ _
         / / / / __ `__ \/ __ `/ __ `__ \/ __ \/ __ `/
        / /_/ / / / / / / /_/ / / / / / / /_/ / /_/ /
       / .___/_/ /_/ /_/\__,_/_/ /_/ /_/_.___/\__,_/
      /_/

Found conda-prefix at '/home/juanlu/.micromamba/envs/climate'. Overwrite?: [y/N] y
pyviz/linux-64                                       1.7kB @   2.5kB/s  0.7s
pyviz/noarch                                        25.1kB @  34.7kB/s  0.7s
anaconda/noarch                                    440.9kB @ 526.1kB/s  0.8s
anaconda/linux-64                                    2.3MB @   2.7MB/s  0.9s
pkgs/main/noarch                                   815.5kB @ 610.0kB/s  0.5s
pkgs/r/noarch                                        1.3MB @ 729.9kB/s  0.9s
pkgs/r/linux-64                                      1.4MB @ 790.1kB/s  1.1s
pkgs/main/linux-64                                   4.7MB @   1.6MB/s  1.6s
conda-forge/noarch                                   9.0MB @   2.1MB/s  3.8s
conda-forge/linux-64                                24.8MB @   3.2MB/s  7.8s
Encountered problems while solving:
  - nothing provides requested anyio 3.6.1 py310h5588dad_0
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The environment can't be solved, aborting the operation
error    libmamba Could not solve for environment specs
critical libmamba UnsatisfiableError

I suspect the reason is that environment.yml was generated using conda env export from a Windows machine:

climate_change_cities/environment.yml

Line 280 in 4549dc1

prefix: D:\Programas\Miniconda3\envs\climate_change

Some background: https://docs.readthedocs.io/en/stable/guides/conda.html#creating-the-environment-yml

There are several ways of exporting a conda environment:

  • conda env export will produce a complete list of all the packages installed in the environment with their exact versions. This is the best option to ensure reproducibility, but can create problems if done from a different operative system than the target machine, in our case Ubuntu Linux.
  • conda env export --from-history will only include packages that were explicitly requested in the environment, excluding the transitive dependencies. This is the best option to maximize cross-platform compatibility, however it may include packages that are not needed to build your docs.
  • And finally, you can also write it by hand. This allows you to pick exactly the packages needed to build your docs (which also results in faster builds) and overcomes some limitations in the conda exporting capabilities.

In summary, it would be nice to provide an environment.yml only with non-pinned, explicit dependencies, like

name: climate_change
channels:
  - conda-forge
dependencies:
  - python=3.10
  - geopandas
  - cartopy
  - xarray
  - rioxarray
  - shapely

Missing database setup

The notebook contains a database connection:

from sqlalchemy import create_engine
db_string = "postgresql://postgres:postgres@localhost:5432/ironhack"
db_connection = create_engine(db_string)

however, there are no instructions on how to set it up. Maybe it would be nice to add a compose.yaml that contains the necessary services.

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