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PolyFun (POLYgenic FUNctionally-informed fine-mapping)
pySCENIC is a lightning-fast python implementation of the SCENIC pipeline (Single-Cell rEgulatory Network Inference and Clustering) which enables biologists to infer transcription factors, gene regulatory networks and cell types from single-cell RNA-seq data.
All Algorithms implemented in Python
PyWGCNA is a Python package designed to do Weighted Gene Correlation Network analysis (WGCNA)
Regulatory Genomics Toolbox: Python library and set of tools for the integrative analysis of high throughput regulatory genomics data.
:postbox: A Memory-efficient, Visualization-enhanced, and Parallel-accelerated Tool For Genome-Wide Association Study
Transcription analysis
SCENIC+ is a python package to build gene regulatory networks (GRNs) using combined or separate single-cell gene expression (scRNA-seq) and single-cell chromatin accessibility (scATAC-seq) data.
A Systematic and Dynamic Pipeline for Single-Cell RNA Sequencing Analysis
很全面的单细胞图谱代码
a framework for training sequence-level deep learning networks
STREAM: Single-cell Trajectories Reconstruction, Exploration And Mapping of single-cell data
R package for "sum of single effects" regression.
TEProf2 Pipeline used to find promoters and predict protein sequences from RNA-sequencing data
R package for bootstrapping motifbreakR results
Transcription factor Occupancy prediction By Investigation of ATAC-seq Signal
Transformer for One-Stop Interpretable Cell-type Annotation
TWAS-pipeline
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.