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openMINDS_chemicals

The openMINDS_chemicals repository is part of the open Metadata Initiative for Neuroscience Data Structures (openMINDS). It extends openMINDS, by providing metadata schemas for in-depth descriptions of chemical substances and mixtures.

For more information please go to the main openMINDS repository.

How to contribute

Please check our contribution document.

License

This work is licensed under the MIT License.

Logo: The openMINDS logo was created by U. Schlegel, based on an original sketch by C. Hagen Blixhavn and feedback by L. Zehl.

openminds_chemicals's People

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apdavison avatar lzehl avatar peyman-n avatar ulrikes91 avatar

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openminds_chemicals's Issues

Discussion about future possible additions

This issue have been created to discuses the possible future expansion of the openMINDS-chemical extension. For the moment following schema are under study :

tracingAgent

property count value
molecularEntity 1-1 CT/MolecularEntity
transportDirection 1-1 CT/transportDirection
transportType 0-1 CT/transportType
spread 1-1 CT/spread
uptakeMechanism 0-1 CT/uptakeMechanism

Antibody

property count value
molecularEntity 1-1 CT/MolecularEntity
target 1-1 CT/MolecularEntity
reactivity 0-1 CT/species
host 1-1 CT/Species
conjugate 0-1 CT/MolecularEntity
clonality 0-1 CT/MolecularEntity
type 1-1 CT/AntibodyType*

*"primary" "secondary"

medicalAgent

property count value
target 1-1 CT/MolecularEntity
drugClass 1-1 CT/DrugClass
....

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