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agatha

AGATHA: Automatic Graph-mining And Transformer based Hypothesis generation Approach

airflow-spell

Apache Airflow operators for the spell.run service

ansible-pyenv

ansible role to install pyenv

automated-biological-evidence-generation-in-drug-discovery

Example code and data samples for "An experimentally validated approach to automated biological evidence generation in drug discovery using knowledge graphs"

aws-ml-opt-out

A Terraform module that makes it a snap to opt out of all AWS AI/ML data harvesting.

biomed-slot-filling

Slot filling for Biomedical Information Extraction

cddd

Implementation of the Paper "Learning Continuous and Data-Driven Molecular Descriptors by Translating Equivalent Chemical Representations" by Robin Winter, Floriane Montanari, Frank Noe and Djork-Arne Clevert.

chembl-graphql

chembl_structure_pipeline

ChEMBL database structure pipelines

circleci-cli

Use CircleCI from the command line

conflr

Post R Markdown documents to Confluence

covidex

Multi-stage search with neural document reranking and paragraph highlighting on the COVID-19 Open Research Dataset

dgem-nn-public

Transcriptomics-based matching of drugs to diseases with deep learning

gnes

GNES is Generic Neural Elastic Search, a cloud-native semantic search system based on deep neural network.

graph2vec

Fastest python node2vec embeddings in the west

lig3dlens

monarch-disease-ontology

A semi-automatically constructed ontology that merges in multiple disease resources to yield a coherent merged ontology.

nf-core-differentialabundance

profiling-recipe

Image-based Profiling Recipe

python-graphjoiner

Implementing GraphQL with joins to avoid the N+1 problem

python-graphlayer

python-precisely

Matcher library for Python

python-semantic-release

Automatic semantic versioning for python projects

pytoml

A TOML-0.4.0 parser/writer for Python.

quick-start-connectors

This open-source repository offers reference code for integrating workplace datastores with Cohere's LLMs, enabling developers and businesses to perform seamless retrieval-augmented generation (RAG) on their own data.

react-day-picker

Flexible date picker for React

react-loader

react-select

A Select control built with and for React JS

scflow

Complete analysis workflow for single-cell/nuclei RNA-sequencing data.

ssosync

Populate AWS SSO directly with your G Suite users and groups using either a CLI or AWS Lambda