For Windows.

https://phoenixnap.com/kb/how-to-install-git-windows

For MacOs

brew install git

For Debian based.

sudo apt install git

git config --global user.name "your-username"
git config --global user.email "your-email"

git clone https://github.com/hcinst/hhai-hackathon.git

pip install -r requirements.txt

collapse.py - our original code for testing the successive collapsing method
megatiles.py - cleaned up and commented code with insertion points for hackathon code (search for “HACKATHON” in multiple places)
pilot_megatiles_experts.csv - annotations from two professional neuropathologists
pilot_megatiles_players.csv - annotations from 30 non-expert volunteers
megatiles_stepwise_collapsing.txt - pseudocode explaining our stepwise collapsing methods

Run the following command to create a new branch and checkout on the branch.

git branch <your-name>-hackathon

git checkout <your-name>-hackathon

Search for “HACKATHON” in multiple places in megatiles.py and add your algorithm there.

Commit your changes to the branch. and push to github.

git commit -am "your message"
git push